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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NCAP_SARS2) | D 1 (D) | polymer(polypeptide(L)) [104 aa] | Nucleoprotein :A0A0D3MU65_9BETC | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [118 aa] | Nucleoprotein :A0A0D3MU65_9BETC | 52W 53F(Y) 75N 77N 79S(T) 82D(Q) 112Y 144D(T) 146I(F) 147G 148T 150N 154N(D) (identity: 53.8 %/55.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6kl2_D_1 identity=55.1% |
queryA 49:TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGT: 148 :* ** * ****** * ** ***** * ** * ** ** ******* ****** ** * **** ** ** * **: 6kl2_D_1 19:TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGT: 116 SecStr : SB EE SS TT TTS GGG EEEEEE --------------- EEEEEETT GGGTTS TT TTEEEEE TT SS S-S : ExpBur :eebebeebeeeeeeebebeeeebbbeeeebeeeebbbbbeee---------------eebebbbbebeebeeeebebeeebbebbeeeeeeeeeee-eee: Contact : bb b b b b b b bbb queryA 149:RNPANNAAIVLQLPQGTTLP: 168 :*** * *** * ** **: 6kl2_D_1 117:RNPNNDSAIVTQFAPGTKLP: 136 SecStr : TTT B TT : ExpBur :beeeeeeeeebeeeeeeeee: Contact : b b |