Protein Model on 1ssk_A_1 (TEMPLATE: 1ssk )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(NCAP_SARS2) A 1 (A) polymer(polypeptide(L)) [158 aa] Nucleocapsid protein :NCAP_CVHSA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ssk_A_1 identity=92.0%
queryA        43:QGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTP: 142
                : ******************* * ************* ************** ******** **************** ******* ** ***********:
1ssk_A_1      21:MGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTP: 120
SecStr          :  S SS S SS EEEE SSS     TT  S   SSS SS  EEEEEEE      TTT       EEEEEEESSSS   S SS   SSEEEE  SS     :    
ExpBur          :eeeeeeeeebbbbbbbeeeeebebeeeebbbebeebbeebebbbbeeeeeeeebeeeeeeeeeeebebebbbeebeeeeeeeeeeeebbbbeeeebeeee:    

queryA       143:KDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS: 180
                :********* **** ***********************:
1ssk_A_1     121:KDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGGS: 158
SecStr          :    S   TTT         SS   STTEE     S  :    
ExpBur          :eeebeeeeeeeeebeebebbeebeeeeebebbbeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123