Protein Model on 7ke8_C_1_U_1 (TEMPLATE: 7ke8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [992 aa] Spike glycoprotein :SPIKE_SARS2
2 b U 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 544R(K) (identity: 0.0 %/72.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7ke8_C_1 identity=72.4%
queryA        35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTF-------GNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRA: 127
                :*  *******  ***  *  ******** **** ** *            *** ** ** *** *****  *** ** *   * **  * ** *****  :
7ke8_C_1      31:SFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKV: 130
SecStr          : TT  EE  SS    SEEEEEE  B  TT EEEEEES  ----------    EE TTEEEEEEEESS  EEEEEEESSSSSSS  EEEEEETTEEEEE :    
ExpBur          :bbbbbbbbbeeeeeeeeeeeeebbbbbbeeebeebeeee----------ebeebebeebbbbbbbbeeeebebbbbbeebeeeeebbebbeeeeeebbeb:    

queryA       128:CNFELCDNPFFAVSKPMGTQTHTMIFDNAF----NCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLP: 223
                :* *  *  **  *                     ****** *             ** ******** **    *    **  ***** **  * *   **:
7ke8_C_1     131:CEFQFCNDPFLGVXXXXXXXXXXXXXXXXXXXXXNCTFEYVSXXXXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLP: 230
SecStr          :      SS EEE ---------------------   SEEE -------------  EEEEEEEEEETTEEEEEEEEEE S TTS  SS  EEEEEEEE :    
ExpBur          :beeeeeeebeeee---------------------eeeeeeee-------------eeebebbbbbeeeeebebbbeeeebeeeebbbeeebbbeeebebe:    

queryA       224:LGINITNFRAILT------AFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                : ***** *   *                    *** **** * ** *** ***********   ** * **  ***   *********** *    ****:
7ke8_C_1     231:IGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFP: 330
SecStr          :      EEEEEEEE ----------------- EEEEEE B  EEEEEE TTS EEEEEETTS HHHHHHHHHT SS  SEEEEEEEE     EEEEE  :    
ExpBur          :beeebeebbbbbbee-----------------ebbbbbebeebebbbebbeebebeebbbbeeeebbebbbeeeebebeebebebeebeeeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :*************** * ***** ** **************  ********** ******** ********  ** ********** ************ :
7ke8_C_1     331:NITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFT: 430
SecStr          :    B THHHHTT S   BGGG EEEEE SEE  HHHHTT TT SEEEEESS TTGGGTS BSEEEEEEEEEEGGGGGGSSSS  STTTTTTT   TT  :    
ExpBur          :eeeeebebeebbeeeebbbbebbeeeebeebebebeebeeeeebeebebeebeeeebebebbbbbbbbbbbbbeebeebbbeeeeeebbeebbebbeebe:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNC-YWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLS: 516
                :*** ***  * *    ***** **        ******                    * **  ***  *   *************** ********* *:
7ke8_C_1     431:GCVIAWNSNNLDSKXXGNYNYLYRXXXXXXXKPFERDIXXXXXXXXXXXXXXXXXXXXYFPLQSYGFQPTNXVGYQPYRVVVLSFELLHAPATVCGPKKS: 530
SecStr          :EEEEEEE TTTT  --  TT EE -------  S    --------------------  S EE    TT - TTSEEEEEEEEEE  SS   EE S   :    
ExpBur          :bbbbbbebbeebbe--ebeebebb-------eeeeeee--------------------eeeeeebebeeee-eeebbebbbbbbbeeeeeebbbbbeeee:    

queryA       517:TDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLT: 616
                :* * ** **************** * * * ********  * ** **** * ***** *************** *  ****** **** *  ********:
7ke8_C_1     531:TNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLT: 630
SecStr          :     SSEEEEEETT    EEEEE      TT  EEE TTSSEEEEE SSS  EEEEESTT EEEEEEE  TTT S  EEEEET  SS  ----------:    
ExpBur          :eebbeeebbebbbbbeeeebbbeeeeeeeeeeebbbeeeeeebebbbbbeeeebbbbeebeebebbbbbbbbeebeebbbbbeebeeeee----------:    
Contact         :                           b                                                                        

queryA       617:PAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTS----QKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVS: 712
                :* ** **** ***** **********  **************** *              ** ********  * ***** ******* ** ***  ***:
7ke8_C_1     631:PTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVS: 730
SecStr          :---------- EEEETTEEEES EE SS    SEEEETTEEEEEE ------------  EEEEEE            TTEEEEEEEEEEEEEEEEEE  :    
ExpBur          :----------eeeebeebbbeebeebeeeeeeebebeeebbbbeee------------eebbbbbeeeeeeeeeeeeeeeeeebbeebebbbeeebbbbb:    

queryA       713:MAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAD: 812
                :* ****** ********** ***************** *** *** ** ******** ****  * ************* ** **************   :
7ke8_C_1     731:MTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTXXX: 830
SecStr          :  EEEE HHHHHHTT HHHHHHHGGGTTTTHHHHHHHHHHHHHHHHHHHHHH   SS     SS  STT  GGGTSB TTSSS  BHHHHHHHHH  ---:    
ExpBur          :bbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbbebeeebeeeeeeebeebebeebbeeeeeeeebbebbbbbbeebe---:    

queryA       813:AGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKA: 912
                :                       ************** *** ** **  ** * ************************************* ****** *:
7ke8_C_1     831:XXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSA: 930
SecStr          :-----------------------  SSEEEE  SS HHHHHHHHHHHHHHHHHHTTHHHHSS     HHHHHHHHHHHTT  THHHHTTHHHHHHHHHHH:    
ExpBur          :-----------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeebebbebbbebbeebebeeebbeeeeeebbebbeeb:    

queryA       913:ISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMS:1012
                :*  ** **  *  ***************************************************************************************:
7ke8_C_1     931:IGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMS:1030
SecStr          :HHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHTTS  TTSS SSSHHHHTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeeeeebeebbebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbe:    

queryA      1013:ECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVI:1112
                :************************ ************** ** ********** *** ******** *** ** *****  *******************:
7ke8_C_1    1031:ECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVI:1130
SecStr          :HHTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE  S EESSSEEEEESSSEEEESSSSEEEE TTS   EE BTTTEEEEEEGGGST:    
ExpBur          :ebbbbbbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeeebbbeeeebbbbbebbbeeeebbeebbeeeeeeeeee:    

queryA      1113:GIINNTVYDPLQPELDS:1129
                :** **************:
7ke8_C_1    1131:GIVNNTVYDPLQPELDS:1147
SecStr          :T EE   B TTTTTTT :    
ExpBur          :eeeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123