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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (C) | polymer(polypeptide(L)) [235 aa] | FACTOR IXA :FA9_PIG | |
2 | b | C 1 (C) | non-polymer(0G6) | D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide | 280V(F) 296H 414Y(F) 435D 436S 437C 438Q 439G 440D 441S 460S 461W 462G 464G(E) (identity: 78.6 %/39.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1pfx_A_1 identity=39.1% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILR-QSFMFYGAGYQVEKVISHPNYDSKTK--NNDIALMKLQ: 352 :***** * ** **** * ****** * ****** * * ** * * * * **** * : 1pfx_A_1 1:IVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEPGVK----ITVVAGEYNTEETEPTEQRRNVIRAIPHHSYNATVNKYSHDIALLELD: 96 SecStr : BT EE TTS TTEEEEE TTS SEEEEEEETTEEEE GGG TT ---- EEEET BTTS TT EEEEEEEEEE TTS SSS TTSS EEEEES: ExpBur :bbeeeebeeeebbbbbbbbbeeeebbbbbbbbeebbbbbbebeeeeee----bebbbbbebeeeebebbbeeeeeeebebeebeeeeeeebebbbbbbbe: Contact : b b b queryA 353:KPLTFNDLVKPVCLPNPGM--MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRY-VYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447 : *** * * * * **** * * ** * * * * * **** * ********** **: 1pfx_A_1 97:EPLTLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFNRGRSATILQYLKVPLVDRATCLRSTKFTIYSN-----MFCAGFHEGGKDSCQGDSGGPHVT: 191 SecStr :S BTTB B HHHHHHHHTTSEEEEEESS SBTTTB SB EEEEEEEE HHHHHHH SS TT-----EEEES SSSS B SS TT EEE: ExpBur :eebeeeeebeebebbeeeebeebbeeeebbbbbbbebeeeeeebeebbbbebeebeeebbeebbeeebeeb-----bbbbbeeeeeebbbebbbbbbbbb: Contact : b bbbbbbb queryA 448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489 : * * *** ** * * * ** : 1pfx_A_1 192:EVEGTSFLTGIISWGEECAVKGKYGIYTKVSRYVNWIKEKTK: 233 SecStr :EETTEEEE EEEE SSSS TT EEEE HHHHHHHHHHHT : ExpBur :eeeeebbbbbbbbbbeebeeeeebbbbbbbbebbebbeeebe: Contact : bbb b |