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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY1_BOVIN | |
2 | b | D 1 (A) | non-polymer(RPR) | 3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER | 340K(N) 341T 419L(Q) 435D 436S 437C 438Q 441S 459T(V) 461W 462G 463S 464G 465C 472G (identity: 80.0 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1f0u_A_1 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * ** * * * **** * ** : 1f0u_A_1 21:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA: 114 SecStr : BS EE TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SST-TS SS EEEEE----EEEEE TT BTTTTBT EEEEESS : ExpBur :bbeeeebeeeebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbbbbbb-eeeeeebbebee----eeebebeeeeeeeeebbbbbbebeeeb: Contact : bb queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * ** * ***** * * ** * * * * ** * *** * * ********** * * : 1f0u_A_1 115:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 206 SecStr : SSSS B SS TT E--EEEEESS SSS SS EEEEEEB HHHHHH--HSTTT TTEEEES TTSS B TT TT EEEETTE----: ExpBur :eeeeebeebeebeeeeeeeee--bebbbbbbeeeeeeeebeebebbebbbbeeeebee--bbeeebeebbbbbbbeebeebbbebbbbbbbbbeee----: Contact : b bbbb b queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * ******* **** * ** : 1f0u_A_1 207:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 243 SecStr :EEEEEEE SSSS TT EEEEEGGGGHHHHHHHHHT : ExpBur :bbbbbbeeeebbeeeebbbbbebbebbebbeebbeee: Contact : b bbbbb b |