CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [349 aa] | Transmembrane protease serine 2 :TMPS2_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [280 aa] | Spike protein S1 :SPIKE_CVHN1 | 341T 409R 413R 414Y 415V 416Y 417D 419L 430L 431Q 461W 463S 468A 469Y 470R (identity: 100.0 %/96.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8vgt_B_1 identity=96.4% |
queryA 131:NWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDA: 230 :*********************************************************************************** ************: 8vgt_B_1 41:NWCDGVSHCPGGEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNXXXXXVDIYKKLYHSDA: 140 SecStr : SSS SSS TTTT EEEETTTTEEEEEETTTTEEEEBB TT HHHHHHHHHTTTTTT EEEEE S S EEEE ----- GGGGEEEES : ExpBur :eebeeeeeeeeeebbebbbbbebeebbbbbbbeeeeeebbbbebebeeeebeebbebbbbeeeeeeeeeeeeeeeeebbbebe-----eebbeebeeeee: queryA 231:CSSKAVVSLRCIACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEK: 330 :****************** ***************************************************************************: 8vgt_B_1 141:CSSKAVVSLRCIACGVNL-XXXXXXIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEK: 239 SecStr : TT EEEEESS S ------- BT EE TTSSTTEEEEEETTEEEEEEEEEETTEEEE SGGG TTTTSGGGEEEEES BGGG TTSSEEEEE: ExpBur :beeebbbbbbbbebbeee-------bbeeeebeebbbbbbbbbbbeeebebbbbbbbbbbbbbbbebbeeeeeeeeebebbbeeeeeeebeeeeeeebee: queryA 331:VISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFL: 430 :****************************************************************************************************: 8vgt_B_1 240:VISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFL: 339 SecStr :EEE TT BTTTTBT EEEEESS SS B TT TT EEEEEESS SSTT SB EEEEEEEE HHHHTSTTTSTTT TTEEEES T: ExpBur :beebeebeeeeeebbbbbbbbeeebeeeeebebbbbbbebbeeeeebebebbbbbbeeeeeeebeebbbbebebbeeeebeeeebbeeebeebbbbbbee: Contact : b b bbbbb b b queryA 431:QGNVDSCQGDSGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :********** ***** ********************************************: 8vgt_B_1 340:QGNVDSCQGDAGGPLVCSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 400 SecStr :T SSB TT TT EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEHHHHHHHHHHHHH : ExpBur :ebebbbbebbbbbbbbbeeeebbbbbbbbbbeeebbeeeebbbbbbbeebbebbbeebeee: Contact :b b b bbb |