Protein Model on 8v04_A_1_C_1 (TEMPLATE: 8v04 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [102 aa] Transmembrane protease serine 2 non-catalytic chain :TMPS2_HUMAN
2 b C 1 (C) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 213N 215S 216A 219V 223K 226Y (identity: 100.0 %/98.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8v04_A_1 identity=98.1%
queryA       148:CVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVN: 247
                :********************************************************  ******************************************:
8v04_A_1       3:CVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDXXSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRCIACGVN: 102
SecStr          : EEEETTTTEEEEEETTTTEEEEBB TT  HHHHHHHHHHTT TT   EEEEE   --  - EEE TT  S  GGGGEEE S  TTS EEEEE S  S  :    
ExpBur          :eeeeeeeeebbbbebeeeeeebbbbebebeeeebebbbeeeeeeeeeebbeeeeee--ee-bbbbeeeeeeeebbebbeebeebeeebbbbbebeeeeee:    
Contact         :                                                                 b bb  b   b  b                     

queryA       248:LNS: 250
                :***:
8v04_A_1     103:LNS: 105
SecStr          :TT :    
ExpBur          :eee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123