[pdbjlvh2]Protein Model on 8fgx_C_1_F

Protein Model on 8fgx_C_1_F_1 (TEMPLATE: 8fgx )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [216 aa]	Plasma kallikrein light chain :KLKB1_HUMAN
2	b		F 1 (C)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	356T(N) (identity: 0.0 %/40.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8fgx_C_1 identity=40.7%

queryA       256:IVGGESALPGAWPWQVSLHVQ---NVHVCGGSIITPEWIVTAAHCVEK-PLNNPWHWTAFAGILRQSFMFYGAGY-QVEKVISHPNYDSKTKNNDIALMK: 350
                :****     * ******* *      * **** *   *  *****    **   *      ***  *         *    * * **     * **** *:
8fgx_C_1     372:IVGGTNSSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWR--IYSGILNLSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIK: 469
SecStr          :  STTB  TTTSTTEEEEEE SSS EEEEEEEE SSSEEEE GGGGTT   SSSEE--EEES SBGGG  TTS  EEEEEEEE TT  TT  TT  EEEE:    
ExpBur          :eeeeeebeeeebbbbbbbbbeeeeeebebbbbbbbeebbbbbbebbeeeeeeeebe--bbbebbbbeebeeeeeebebeebbebeebeeeeeeebbbbbe:    

queryA       351:LQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKN: 450
                :** **      ** ***  *        **  ***           *      *     *  **  *  **  * ***          ********   *:
8fgx_C_1     470:LQAPLNYTEFQKPICLPSKGDTSTIYTNCWVTGWGFSXXXXEIQNILQKVNIPLVTNEECQKRY-QDYKITQRMVCAGXXXXXXXXXKGDSGGPLVCKHN: 568
SecStr          :ESS     SS    B   GGGGS   SSEEEEE    ----   SB EEEE  EE HHHHHTT -TTS   TTEEEE ---------   TT EEEEEET:    
ExpBur          :beeebeeeeebeebebbeeebeeeebeebebbbbbee----eeeeebbbeebebeeeeebeeeb-eeeebeeebbbbe---------eebebbbbbbeee:    
Contact         :     b                                                                                              

queryA       451:NIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :  * * * ****        ****  *    ***     :
8fgx_C_1     569:GMWRLVGITSWGXXXXXXXQPGVYTKVAEYMDWILEKTQ: 607
SecStr          :TEEEEEEEES  -------  EEEEETTTTHHHHHHHH :    
ExpBur          :eeeebbbbbbee-------ebbbbbbbbbbbebbeeeee:

Protein Model on 8fgx_C_1_F_1 (TEMPLATE: 8fgx )

Input Residue Numbers for Focused Sites