Protein Model on 8f7v_A_1_C_1 (TEMPLATE: 8f7v )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [242 aa] Plasminogen :PLMN_HUMAN
2 b C 1 (A) non-polymer(EUA) (6S,9R,19S,22R)-N-{[4-(aminomethyl)phenyl]methyl}-22-[(benzenesulfonyl)amino]-3,12,21-trioxo-2,6,9,13,20-pentaazatetracyclo[22.2.2.2~6,9~.2~14,17~]dotriaconta-1(26),14,16,24,27,29-hexaene-19-carboxamide 296H 345D 419L(R) 435D 436S 437C 438Q 441S(A) 459T 460S 461W 462G 463S(L) 464G 465C 472G (identity: 81.2 %/39.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8f7v_A_1 identity=39.6%
queryA       256:IVGGESALPGAWPWQVSLHVQ-NVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKP: 354
                : ***  * *  *******      * ***  * ***  ***** **                           *      *         **** **  *:
8f7v_A_1      21:VVGGCVAHPHSWPWQVSLRTXXGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSSP: 114
SecStr          : BSSEE  TTSSTTEEEEE --  EEEEEEEEETTEEEE GGGGTT   GGG EEEES SBSSS  TT EEEEEEEEEE TT------S S EEEEESS :    
ExpBur          :bbeebebeebbbbbbbbbbe--eebebbbbbbbeebbbbbbebbeebeeeeebebbbbbbeeeeeeeebbebebeebbebee------eeebbbbbbeee:    
Contact         :                                         b                                                b         

queryA       355:LTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :    * * * *** *         * * *** *         *  *    **   **              *** * *  ****** *****        :
8f7v_A_1     115:AVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAG-LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYI: 213
SecStr          :    SS    B   TT    TT EEEEEES   TT S TT-B EEEEEEEE HHHHTSTTTTTT   TTEEEE  TT S B  TT TT EEEEEETTEEE:    
ExpBur          :beeeeebbbbbebeeeeebeeeeebbbbbbbebeebeeeb-ebbbbebbbbebebbeeeebbeeebeebbbbbbeeeeeebbbeebebbbbbbeeeeebb:    
Contact         :                                                                b               bbbb  b             

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :* * **** ***    ****  *  *  **   **:
8f7v_A_1     214:LQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR: 248
SecStr          :EEEEEEE SSSS TT  EEEEEGGGTHHHHHHHHH:    
ExpBur          :bbbbbbeeeebbeeeebbbbbbbbebbeebebbee:    
Contact         :    bbbbbbb      b                                                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123