[pdbjlvh2]Protein Model on 7uah_B_1_H

Protein Model on 7uah_B_1_H_1 (TEMPLATE: 7uah )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [250 aa]	Plasminogen :PLMN_HUMAN
2	b		H 1 (B)	non-polymer(NZ5)	(2~{R})-butane-1,2-diol	413R(Y) 414Y(E) 415V(F) 417D(N) 419L(R) 470R(K) (identity: 0.0 %/39.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7uah_B_1 identity=39.9%

queryA       255:RIVGGESALPGAWPWQVSLHVQ-NVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353
                :* ***  * *  *******      * ***  * ***  ***** **                           *      *         **** **  :
7uah_B_1      20:RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSS: 113
SecStr          :  BSSEE  TTSSTTEEEEEETTS EEEEEEEEETTEEEE GGGGTT   GGGEEEEES SB STT TT EEEEEEEEEE TT------  S EEEEESS:    
ExpBur          :ebbbebebeebbbbbbbbbbbeeeebebbbbbbbeebbbbbbebbeebeeeebbbbbbbbbeeeeebeeebebebeebbebee------eebbbbbebee:    

queryA       354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIW: 453
                :*    * * * *** *         * * *** *         *  *    **   **              *** * *  ****** *****       :
7uah_B_1     114:PAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAG-LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKY: 212
SecStr          :    BTTB   B   TT    TT EEEEEES   SSSS TT-B EEEEEEEE HHHHTSTTTTTT   TTEEEE  TTSS B  TTTTT EEEEEETTEE:    
ExpBur          :ebeeeeebbbbbebeeeeebeeeeebbbbbbbebeeeeeee-ebbbbbbbbbebeebeeeebbeeebeebbbbbbeeebeebbbebbebbbbbbeeeeeb:    
Contact         :                                                           bbb b b                                  

queryA       454:WLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                : * * **** ***    ****  *  *  **   **:
7uah_B_1     213:ILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR: 248
SecStr          :EEEEEEEE SSSS TT  EEEEEGGGTHHHHHHHHH:    
ExpBur          :bbbbbbbeeeebbeeeebbbbbbbbebbeebebbee:    
Contact         :                b

Protein Model on 7uah_B_1_H_1 (TEMPLATE: 7uah )

Input Residue Numbers for Focused Sites