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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | E 1 (B) | polymer(polypeptide(L)) [254 aa] | Activated factor Xa heavy chain :FA10_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [709 aa] | Coagulation factor Va :FA5_HUMAN | 334H 335P(N) 336N(R) 337Y(F) 338D(T) 339S(K) 340K(E) 341T 343N(D) 369P(R) 407T(R) 411N(K) 415V(S) 416Y(F) 419L(I) 421T 422P(Q) 463S(E) 476N(K) 479V(A) 482D(K) 483W 486R (identity: 21.7 %/37.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7tpp_E_1 identity=37.8% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352 :**** * *** * * *** * * ***** * * * * * ** ** * * *** * : 7tpp_E_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95 SecStr : B SSS EEE SSS EEEE BSSSS BEE STT----TTTS EEETT - SSS STT EEEE SS SSS SS EEEEES: ExpBur :eeeeeebeeeebbbbbbbbbeeeeeebbbbbbebebbbbbbbb----beeeeebebbbbb-bebeeeeeebbebebeebbebeebeeeebbbbbbbbbbe: Contact : bbbbbbbb b queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449 : * ** * * *** * ** * * *** * * * * ** * *** * **** *** ** : 7tpp_E_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDAGGPHVTRF: 193 SecStr :S SS GGGGSSSSSS B B S SS SS SS B B GGGTTTTSSS-- SSSB S TTS SS SSTT EEEE : ExpBur :eebeeeebbbebeebeeeeeeebeeeeeebbbbbbbbbeeeeeeeeebbbbebeebeeeebeebbee--ebeebbbbbbeeeeeebbbbbbbbbbbbbeb: Contact : b b b bb b bb queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 492 : * *** *** * * * * ** * * *: 7tpp_E_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRG: 236 SecStr :SSS EEEEE SS SS S B TTTTHHHHHHTTSTT : ExpBur :eeeebbbbbbbebeebeebbebbbbbbbbebbebbeebbeebe: Contact : b b b bb b |