[pdbjlvh2]Protein Model on 6m3b_A_1_D

Protein Model on 6m3b_A_1_D_1 (TEMPLATE: 6m3b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [228 aa]	Vitamin K-dependent protein C heavy chain :PROC_HUMAN
2	b		D 1 (C)	polymer(polypeptide(L)) [223 aa]	c25k23 Fab H chain	339S(K) 340K(S) 341T 342K(T) 411N(S) 412S(E) 415V 416Y(M) 417D(S) 418N 419L(M) 436S(A) 437C 438Q(E) 441S 459T(V) 460S 461W 462G 463S(E) 464G (identity: 42.9 %/35.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6m3b_A_1 identity=35.4%

queryA       256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKP: 354
                :   *     *  **** *        **   * * *  *****                 **              *  ****   *  *****  *  *:
6m3b_A_1       1:LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYD--LRR-WEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQP:  97
SecStr          : BS EE  TTS TTEEEEE TTS EEEEEEEEETTEEEE GGGGSS S  EEEES  B--SSS-  TT EEEEEEEEEE TT  TTT  S  EEEEESS :    
ExpBur          :bbebeebeeeebbbbbbbbeeeeeeebbbbbbeebbbbbbbebbeeeeebbbbbbbbe--eee-eeeebeebebeeebebeebeeeebbbbbbbbebeee:    
Contact         :                                                                                    bbbb            

queryA       355:LTFNDLVKPVCLPNPGM----MLQPEQLCWISGWG-----ATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPL: 445
                : *      * ***  *       *  *     ***               ***  *        *    *  *     * *** *    * * ****** :
6m3b_A_1      98:ATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHXXXXXXXXXXXTFVLNFIKIPVVPHNECSE--VMSNMVSENMLCAGILGDRQDACEGDSGGPM: 195
SecStr          :   BTTB   B   HHHHHHTTTSTT EEEEEE S  -----------  B EEEEEEEE HHHHHH--H SS   TTEEEE  TT   B  TTTTT EE:    
ExpBur          :beeeebbeebeebeebbbeeebbeeebebebbbbbee-----------eebbbebebebbeeeebee--ebeeebbebbbbbbeeeeeebbbeebbbbbb:    
Contact         :                                                                 bb  bbbbb                bbb  b    

queryA       446:VTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :* *    * * *  *** **      ***  *    ***    *:
6m3b_A_1     196:VASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR: 239
SecStr          :EEEETTEEEEEEEEEE SSSS SS  EEEEEGGGGHHHHHHHH :    
ExpBur          :bbeeeeeebbbbbbbbeeeebeeebbbbbbbbbebbebbeeeee:    
Contact         :             bbbbbb

Protein Model on 6m3b_A_1_D_1 (TEMPLATE: 6m3b )

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