[pdbjlvh2]Protein Model on 5voe_A_1_C

Protein Model on 5voe_A_1_C_1 (TEMPLATE: 5voe )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (H)	polymer(polypeptide(L)) [231 aa]	Coagulation factor X :FA10_HUMAN
2	b		C 1 (A)	polymer(polyribonucleotide)	Aptamer 11F7t (36-MER)	302L 303N(Y) 331V 332I 333S(K) 335P(N) 336N(R) 344N(F) 482D(K) 483W 486R 489R(K) (identity: 41.7 %/37.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5voe_A_1 identity=37.0%

queryA       256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
                :****     *  ***  *    *   *** *     * *****    *          *  *      *  *   ** ** *      *   ***   * :
5voe_A_1       1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK:  95
SecStr          : BSSEE  TTS TTEEEEEETTS EEEEEEE SSSEEEE GGG----GGS SSEEEEES -SBTT   SS EEE EEEEEE TT BTTTTBT  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeebbbbbbbbbeebbbbbbbb----eeebeebebbbbb-ebeeeeeeebeebebeeeeebeebeeeeebebbbbbebe:    
Contact         :                                               bb                             bbb bb       b        

queryA       353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
                : * **   * * ***        *        ** * * *    *  *    *       *         **  * ***      * **** *** **  :
5voe_A_1      96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEXXRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDAGGPHVTRF: 193
SecStr          :S    BTTB   B   HHHHHHHTTTSSEEEEEES BS  -- B SB EEEEEEEE HHHHHHH SS--   TTEEEES SSSS B  TT TT EEEEEE:    
ExpBur          :eebeeeebbeebeebeeeebeebbbeeeebbbbbbbeeee--eebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbbbbbbbbee:    

queryA       450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :       *  *** ***     * *  *  *  ** * * :
5voe_A_1     194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK: 233
SecStr          :TTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHH :    
ExpBur          :eeeebbbbbbbbebebbeeebbbbbbbbbebbebbeebee:    
Contact         :                                bb  b  b

Protein Model on 5voe_A_1_C_1 (TEMPLATE: 5voe )

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