CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [220 aa] | Cationic trypsin :TRY1_BOVIN | |
2 | b | C 1 (A) | non-polymer(SIN) | SUCCINIC ACID | 280V(F) 281C 296H 438Q 439G 441S (identity: 83.3 %/40.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jyi_A_1 identity=40.5% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * ** * * * **** * ** : 5jyi_A_1 24:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA: 117 SecStr : S EE TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SBT-TS S EEEEE----EEEEE TT TTT TT EEEEESS : ExpBur :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbeeb-eeeeeebbebee----eeeeebeeeeeeebebbbbbbbbeeeb: Contact : bb b queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * ** * ***** * ** * * * * ** * *** * * ********** * * : 5jyi_A_1 118:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKXXXTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGXDSCQGDSGGPVVCSGK----: 209 SecStr : SSSS B SS TT E--EEEEES --- S SB EEEEEEB HHHHHH--HSTTT TTEEEES SS - TTTTT EEEETTE----: ExpBur :eeeeebeebebbeeeeeeebe--bebbbbbbee---eeeeeebbbbebebbeeeebee--bbeeebeeebbbbbeeeee-bbbebbbbbbbbbeeb----: Contact : b bb b queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * ******* **** * ** : 5jyi_A_1 210:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 246 SecStr :EEEEEEE SSSS TT EEEEEGGG HHHHHHHHHH : ExpBur :bbbbbbbeeebbeeeebbbbbebbebeebbeebbeee: |