[pdbjlvh2]Protein Model on 3rdz_A_1_B

Protein Model on 3rdz_A_1_B_1 (TEMPLATE: 3rdz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Cationic trypsin :TRY1_BOVIN
2	b		B 1 (C)	polymer(polypeptide(L)) [67 aa]	BWI-1=PROTEASE inhibitor/trypsin inhibitor :Q9S9F3_FAGES	278V(Y) 279H 280V(F) 281C 296H 392K(T) 435D 436S 437C 438Q 439G 440D 441S 460S 461W 462G 463S 464G 465C 472G (identity: 85.0 %/40.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3rdz_A_1 identity=40.5%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                       *  *     * * ** * * * **** * **    :
3rdz_A_1       1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA:  94
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SST-TS  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeeeebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbebbbb-eeeeeebbebeb----eebeebeeeeeeebebbbbbbebeeeb:    
Contact         :                      bbbb              b                                                           

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :     *    **           * ***** *   *     **   *        * *   *   **  * *** * *  ********** * *      :
3rdz_A_1      95:SLXXXVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 186
SecStr          :  ---    B  SS   TT E--EEEEES    SSS    SS EEEEEEB  HHHHHH--HSTTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :ee---eeebebbeeeeeeeee--bebbbbbbeeeeeeeebeebebbebbbbeeeebee--bbeeebeebbbbbbbeebeebbbeebbbbbbbbeee----:    
Contact         :                                    b b                                         bbbbbbb             

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *******    ****  *     **       :
3rdz_A_1     187:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 223
SecStr          :EEEEEEE SSSSBTTB EEEEEGGGSHHHHHHHHHT :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebeebbeebeeee:    
Contact         :     bbbbbb      b

Protein Model on 3rdz_A_1_B_1 (TEMPLATE: 3rdz )

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