[pdbjlvh2]Protein Model on 3pm3_A_1_C

Protein Model on 3pm3_A_1_C_1 (TEMPLATE: 3pm3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	Cationic trypsin :TRY1_BOVIN
2	b		C 1 (A)	non-polymer(TFN)	N-(benzylsulfonyl)-O-tert-butyl-D-seryl-N-(4-carbamimidoylbenzyl)glycinamide	296H 340K(E) 342K(Y) 435D 436S(A) 437C 438Q 441S 459T(V) 460S 461W 462G 463S 464G 465C 472G (identity: 75.0 %/39.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3pm3_A_1 identity=39.6%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                       *  *     * * ** * * * **** * **    :
3pm3_A_1       1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSETYNNDIMLIKLKSAA:  94
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SST-TS  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbbbbbb-eeeeeebbebee----eeeeebeeeeeeeeebbbbbbebeeeb:    
Contact         :                                        b                                           b b             

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTS-EVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *    **           * ***** *   *     **   *        * *       **  * *** * *  * ******** * *      :
3pm3_A_1      95:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSASSF--IITSNMFCAGYLEGGKDACQGDSGGPVVCSGK----: 186
SecStr          :  BTTB   B  SS   TT E--EEEEESS   SSS    SS EEEEEEEE HHHHHHHH  --   TTEEEES TTSS B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebebbeeeeeeeee--bebbbbbbeeeeeeeebeebebbebbbbeeeebeeebeb--ebeebbbbbbbeebeebbbeebbbbbbbbeee----:    
Contact         :                                                                                bbbb  b             

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *******    ** *  *     **       :
3pm3_A_1     187:LQGIVSWGSGCAQKNKPGIYTKVCNYVSWIKQTIASN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHH :    
ExpBur          :bbbbbbeeeebbeeeebbbbbebbebbebbeebeeee:    
Contact         :    bbbbbbb      b

Protein Model on 3pm3_A_1_C_1 (TEMPLATE: 3pm3 )

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