[pdbjlvh2]Protein Model on 3myw_A_1_C

Protein Model on 3myw_A_1_C_1 (TEMPLATE: 3myw )

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[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	Trypsin :TRYP_PIG
2	b		C 1 (B)	polymer(polypeptide(L)) [223 aa]	Trypsin :TRYP_PIG	338D(N) 340K(N) 341T 417D(P) 418N(G) (identity: 20.0 %/41.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3myw_A_1 identity=41.9%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                 *     *  *     * * ***    *  *** * **  * :
3myw_A_1       1:IVGGYTCAANSVPYQVSLN-SGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNID-VLEGNEQFINA----AKIITHPNFNGNTLDNDIMLIKLSSPA:  94
SecStr          : BT EE  TTS TTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SBSS-S  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeeeebebbbbbb-eeebebbbbbbeeebbbbbbebeeeebebbbbbbbee-eeeeebbebeb----eeeeebeeeeeeeeebbbbbbbbeeeb:    
Contact         :                                                                                  b bb              

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :* *  *  * **        *  * ***** *   *      *   *        * *   *   **  *** *** *  ********** *        :
3myw_A_1      95:TLNSRVATVSLPRSCAAAGTE--CLISGWGNTKSSGSSYPSLLQCLKAPVLSDSSCKS--AYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ----: 186
SecStr          :  SSSS   B  SS   TT E--EEEEES    SSS    SB EEEEEEB  HHHHHH--HSTTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeebbeebeebeeeeeeeee--bbbbbbbbeeeeeeeebeebbbbebbbbeeeebee--bbeeebeebbbbbbbeebeebbbeebbbbbbbbeeb----:    
Contact         :                                                              bb                                    

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *     **     * :
3myw_A_1     187:LQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHH :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebbebbeebeeee:

Protein Model on 3myw_A_1_C_1 (TEMPLATE: 3myw )

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