Protein Model on 3hpt_B_1_O_1 (TEMPLATE: 3hpt )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (B) polymer(polypeptide(L)) [238 aa] Coagulation factor X :FA10_HUMAN
2 b O 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 259G 260E(Q) 399A(M) 400A(L) 401K(E) 434V(E) (identity: 16.7 %/38.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3hpt_B_1 identity=38.3%
queryA       256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
                :****     *  ***  *    *   *** *     * *****    *          *  *      *  *   ** ** *      *   ***   * :
3hpt_B_1       1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK:  95
SecStr          : BSSEE  TTTSTTEEEEE TTS EEEEEEE SSSEEEE HHH----HTT SS EEEES -SBSSS  SS EEEEEEEEEE TT BTTTTBT  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbbeebbbbbbbb----beebeebebbbbb-beeeeeeeeeeebebeeeeebeebeeeeebbbbbbbbbe:    
Contact         :   bb                                                                                               

queryA       353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
                : * **   * * ***        *        ** * * ***  *  *    *       *         **  * ***      * ******** **  :
3hpt_B_1      96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr          :S    BTTB   B   HHHHHHHTTTSSEEEEEESSBSSTTS B SB EEEEEEEE HHHHHHH SS--   TTEEEES SSSS B  TT TT EEEEEE:    
ExpBur          :eebeeeebbeebeebeeeebeebbbeeeebbbbbbbeeeeeeeebebbbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbbbbbbbbee:    
Contact         :                                                 bbb                                b               

queryA       450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 492
                :       *  *** ***     * *  *  *  ** * *   *:
3hpt_B_1     194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRG: 236
SecStr          :TTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHS S:    
ExpBur          :eeeebbbbbbbbebebbeeebbbbbbebbebbebbeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123