[pdbjlvh2]Protein Model on 2y6t_A_1_F

Protein Model on 2y6t_A_1_F_1 (TEMPLATE: 2y6t )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [240 aa]	CHYMOTRYPSINOGEN A :CTRA_BOVIN
2	b		F 1 (F)	polymer(polypeptide(L)) [142 aa]	ECOTIN :ECOT_YERPY	335P(S) 336N(K) 337Y 344N 369P(A) 478M(T) 479V(A) 480F(L) 481T(V) 482D(N) 483W 486R(Q) (identity: 25.0 %/40.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2y6t_A_1 identity=40.5%

queryA       251:SRQSRIVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIAL: 348
                :*    ** ** * ** *******      * **** *   * ******              **   * *           **     * * * **** *:
2y6t_A_1      11:SXXXXIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITL: 105
SecStr          : ---- BT EE  TTSSTTEEEEE TT  EEEEEEESSSSEEEE STT   TT -----EEEES SBSS S S  EEEEEEEEEE TT BTTTTBS  EE:    
ExpBur          :e----bbeeeebeebbbbbbbbbeeeeeebebbbbbbeeebbbbbbebebeeeb-----ebbbbbbeeeeeeeeebebebeeebebeebeeeeebbbbbb:    
Contact         :                                                                                      bbb      b    

queryA       349:MKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                : **     *   *  ****           *   *** *      *   *  *   *     *         *  ******     * ** ******** :
2y6t_A_1     106:LKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTXANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVC: 201
SecStr          :EEESS     SS    B   SS    TT EEEEEE   S  --  S SB EEEEEEB  HHHH--HHHHGGG  TTEEEEE-- SS B  TT TT EEEE:    
ExpBur          :bebeeebeeeeebbbbbebeeeeebeeeeebbbbbbbbeee--eeebeebbbbebebbebeeb--eeebeeebeebbbbbb--eeebbbbeebebbbbbb:    
Contact         :                    b                                                                               

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : **  * * *  ****       ****  *     *      * :
2y6t_A_1     202:KKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 245
SecStr          :EETTEEEEEEEEEE  TT  TTSEEEEEEGGGTHHHHHHHHHT :    
ExpBur          :eeeebbbbbbbbbbebeebeeeebbbbbbbbebbebbeebbeee:    
Contact         :                              bbbbbb  b

Protein Model on 2y6t_A_1_F_1 (TEMPLATE: 2y6t )

Input Residue Numbers for Focused Sites