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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [234 aa] | ACTIVATED FACTOR XA HEAVY CHAIN :FA10_HUMAN | |
2 | b | C 1 (A) | non-polymer(XWG) | (3AS,4R,5S,8AS,8BR)-4-[5-(5-CHLOROTHIOPHEN-2-YL)-1,2-OXAZOL-3-YL]-2-[3-[1-(2-HYDROXYETHYL)PYRROLIDIN-1-IUM-1-YL]PROPYL]-4,6,7,8,8A,8B-HEXAHYDRO-3AH-PYRROLO[3,4-A]PYRROLIZINE-1,3-DIONE | 340K(E) 341T 342K(Y) 386A(R) 416Y(F) 435D 436S(A) 437C 438Q 459T(V) 461W 462G 464G 472G 473V(I) 474Y (identity: 56.2 %/38.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2y5f_A_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352 :**** * *** * * *** * * ***** * * * * * ** ** * * *** * : 2y5f_A_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95 SecStr : BSSEE TTS TTEEEEE TTS EEEEEEE SSSEEEE GGG----GGS SS EEEES -SBTTS S EEE EEEEEE TT TTT TT EEEEES: ExpBur :bbeeeebeeeebbbbbbbbeeeeebbbbbbbbeebbbbbbbbb----beebeebebbbbb-ebeeeeeeebeebebeeeeebeebeeeeebbbbbbbebe: Contact : bbb queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449 : * ** * * *** * ** * * *** * * * * ** * *** * ******** ** : 2y5f_A_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193 SecStr :S BTTB B HHHHHHHTTTSSEEEEEES BSSTTS B SB EEEEEEEE HHHHHHH SS-- TTEEEES SSSS B TTTTT EEEEEE: ExpBur :eebeeeebbeebeebeeeebeebbbeeeebbbbbbbeeebebeebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbbbbbbbbee: Contact : b b bbbb queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490 : * *** *** * * * * ** * * : 2y5f_A_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234 SecStr :TTEEEEEEEEEE SSSS TT EEEEEGGGGHHHHHHHT -: ExpBur :eeeebbbbbbbbebebbeeebbbbbbbbbbbbebbeebbe-: Contact : b bb b bbb |