Protein Model on 2w3i_A_1_D_1 (TEMPLATE: 2w3i )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [234 aa] COAGULATION FACTOR X, HEAVY CHAIN :FA10_HUMAN
2 b D 1 (A) non-polymer(L1C) (2R,4S)-N^1^-(4-chlorophenyl)-4-(2,4-difluorophenyl)-4-hydroxy-N^2^-(2-oxo-2H-1,3'-bipyridin-6'-yl)pyrrolidine-1,2-dicarboxamide 339S(K) 340K(E) 341T 342K(Y) 386A(R) 389E 390K 416Y(F) 435D 436S(A) 438Q 459T(V) 460S 461W 462G 464G 465C 467K(R) 472G 473V(I) 474Y (identity: 57.1 %/38.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2w3i_A_1 identity=38.2%
queryA       256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
                :****     *  ***  *    *   *** *     * *****    *          *  *      *  *   ** ** *      *   ***   * :
2w3i_A_1       1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK:  95
SecStr          : BSSEE  TTS TTEEEEEETTS EEEEEEE SSSEEEE GGG----GGS SSEEEEES -SBTTS  SS EEE EEEEEE TT  TTT  S  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeebbbbbbbbeeebbbbbbbb----beebeebebbbbb-ebeeeeeebbeebebeeeeebeebeeeeebbbbbbbebe:    
Contact         :                                                                                      bbbb          

queryA       353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
                : * **   * * ***        *        ** * * ***  *  *    *       *         **  * ***      * ******** **  :
2w3i_A_1      96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr          :S    BTTB   B   HHHHHHHTTTSSEEEEEESS SSTTS   SB EEEEEEB  HHHHHHH SS--   TTEEEES SSSS B  TT TT EEEEEE:    
ExpBur          :eebeeeebbeebeebeeeebeeebbeeeebbbbbbbeeeeeeeebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeeebbbebbbbbbbbbee:    
Contact         :                                    b  bb                         b                  bb b           

queryA       450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                :       *  *** ***     * *  *  *  ** * *  :
2w3i_A_1     194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234
SecStr          :TTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHH :    
ExpBur          :eeeebbbbbbbbebebbeeebbbbbbebbebbebbeebeee:    
Contact         :         bbbb bb b    bbb                                                                           


Input Residue Numbers for Focused Sites

ex) 2,15,123