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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [234 aa] | ACTIVATED FACTOR XA HEAVY CHAIN :FA10_HUMAN | |
2 | b | C 1 (A) | non-polymer(RIV) | 5-chloro-N-({(5S)-2-oxo-3-[4-(3-oxomorpholin-4-yl)phenyl]-1,3-oxazolidin-5-yl}methyl)thiophene-2-carboxamide | 339S(K) 340K(E) 341T 342K(Y) 416Y(F) 435D 436S(A) 437C 438Q 441S 459T(V) 461W 462G 463S(E) 464G 465C 472G 473V(I) 474Y (identity: 57.9 %/38.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2w26_A_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352 :**** * *** * * *** * * ***** * * * * * ** ** * * *** * : 2w26_A_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95 SecStr : BSSEE TTSSTTEEEEE TTS EEEEEEE SSSEEEE GGG----GGS SS EEEES -SBTTS S EEE EEEEEE TT TTT TT EEEEES: ExpBur :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbeeebbbbbbbb----beebeebebbbbb-ebeeeeeebbeebebeeeeebeebeeeeebbbbbbbebe: Contact : bbbb queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449 : * ** * * *** * ** * * *** * * * * ** * *** * ******** ** : 2w26_A_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193 SecStr :S BTTB B HHHHHHHTTTSSEEEEEES BSSSSS B SB EEEEEEEE HHHHHHH SS-- TTEEEES SSSS B TT TT EEEEEE: ExpBur :eebeeeebbeebeebeeeebeeebbeeeebbbbbbbeeeeeeeebeebbbbebebbeeeebeeebee--ebbebbbbbbeeeeebbbbebbbbbbbbbee: Contact : b bbbb b queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490 : * *** *** * * * * ** * * : 2w26_A_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234 SecStr :TTEEEEEEEEEE SSSS TT EEEEEGGGGHHHHHHHT -: ExpBur :eeeebbbbbbbbebebbeeebbbbbbebbebbebbeebbe-: Contact : b bbbbb bbb |