Protein Model on 2jkh_A_1_C_1
(TEMPLATE: 
2jkh
)Protein Model on 2jkh_A_1_C_1
(TEMPLATE: 2jkh
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [234 aa] | ACTIVATED FACTOR XA HEAVY CHAIN :FA10_HUMAN | |
| 2 | b | C 1 (A) | non-polymer(BI7) | 3-[(3~{a}~{S},4~{R},8~{a}~{S},8~{b}~{R})-4-[5-(5-chloranylthiophen-2-yl)-1,2-oxazol-3-yl]-1,3-bis(oxidanylidene)-4,6,7,8,8~{a},8~{b}-hexahydro-3~{a}~{H}-pyrrolo[3,4-a]pyrrolizin-2-yl]propyl-trimethyl-azanium | 340K(E) 341T 342K(Y) 386A(R) 416Y(F) 435D 436S(A) 437C 438Q 459T(V) 461W 462G 464G 472G 473V(I) 474Y (identity: 56.2 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2jkh_A_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
:**** * *** * * *** * * ***** * * * * * ** ** * * *** * :
2jkh_A_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95
SecStr : BSSEE TTSSTTEEEEE TTS EEEEEEE SSSEEEE GGG----GGS SS EEEES -SBTT S EEE EEEEEE TT BTTTTBT EEEEES:
ExpBur :bbeeeebeeeebbbbbbbbeeeeebbbbbbbbeeebbbbbbbb----beebeebebbbbb-ebeeeeeeebeebebeeeeebeebeeeeebbbbbbbebe:
Contact : bbb
queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
: * ** * * *** * ** * * *** * * * * ** * *** * ******** ** :
2jkh_A_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr :S BTTB B HHHHHHHTTTSSEEEEEES BSSTTS B SB EEEEEEEE HHHHHHH SS-- TTEEEES SSSS B TTTTT EEEEEE:
ExpBur :eebeeeebbeebeebeeeebeebbbeeeebbbbbbbeeeeebeebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbbbbbbbbee:
Contact : b b bbbb
queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
: * *** *** * * * * ** * * :
2jkh_A_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234
SecStr :TTEEEEEEEEEE SSSS TT EEEEEGGGGHHHHHHHT -:
ExpBur :eeeebbbbbbbbebebbeeebbbbbbbbbebbebbeebbe-:
Contact : b bb b bbb
|
[assembly_id:1]
[help]