Protein Model on 2fs9_A_1_E_1 (TEMPLATE: 2fs9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [243 aa] Tryptase beta-2 :TRYB2_HUMAN
2 b E 1 (A) non-polymer(C4A) ETHYL {(1S)-5-AMINO-1-[(5-{4-[(2,3-DIHYDRO-1H-INDEN-2-YLAMINO)CARBONYL]BENZYL}-1,2,4-OXADIAZOL-3-YL)CARBONYL]PENTYL}CARBAMATE 280V(F) 296H 297C 303N(K) 304N(D) 310A 311F(L) 340K(A) 435D 436S 437C 438Q 439G 440D 441S 459T(V) 460S 461W 472G (identity: 68.4 %/40.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2fs9_A_1 identity=40.3%
queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
2fs9_A_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE   SBTTTS   EEEEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbebeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeebeebbbbbbbeb:    
Contact         :                           b               bb     bb     bb                             b           

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
2fs9_A_1      98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT EEEEEES  SBTTB   TT B EEEEEEEE HHHHHHHHHTT  S TTS SS TTEEEE -- SS B  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeeeebebbbbbbbeeeeebeeeebbbbbebebbebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb:    
Contact         :                                                                                            bbbbbbb 

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2fs9_A_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHT:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee:    
Contact         :                bbb          b                                                                      


Input Residue Numbers for Focused Sites

ex) 2,15,123