[pdbjlvh2]Protein Model on 1yyy_A_1_C

Protein Model on 1yyy_A_1_C_1 (TEMPLATE: 1yyy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (1)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY1_BOVIN
2	b		C 1 (1)	non-polymer(0KV)	2-{(3S)-3-[(benzylsulfonyl)amino]-2-oxopiperidin-1-yl}-N-{(2S)-1-[(3S)-1-carbamimidoylpiperidin-3-yl]-3-oxopropan-2-yl}acetamide	296H 342K(L) 435D 436S 437C 438Q 439G 440D 441S 460S 461W 462G 463S 464G 472G (identity: 93.3 %/41.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1yyy_A_1 identity=41.0%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                       *  *     * * ** * * * **** * **    :
1yyy_A_1       1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA:  94
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SSS-SS  S  EEEEE----EEEEE TT BTTTTBT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbb-eeeeeebeebeb----eeebebeeeeeeebebbbbbbebeeeb:    
Contact         :                                        b                                             b             

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *    **           * ***** *   *     **   *        * *   *   **  * *** * *  ********** * *      :
1yyy_A_1      95:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 186
SecStr          :  SSSS   B  SS   TT E--EEEEESS   SSS    SS EEEEEEB  HHHHHH--HSTTT  TTEEEES TTSS B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebebbeeeeeeeee--bebbbbbbeeeeeeeebeebebbebbbbeeeebee--bbeeebeebbbbbbbeebeebbbeebbbbbbbbeee----:    
Contact         :                                                                                bbbbbbb             

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *******    ****  *     **       :
1yyy_A_1     187:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHT :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebbebbeebbeee:    
Contact         :     bbbbb       b

Protein Model on 1yyy_A_1_C_1 (TEMPLATE: 1yyy )

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