[pdbjlvh2]Protein Model on 1trm_B_1_A

Protein Model on 1trm_B_1_A_1 (TEMPLATE: 1trm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY2_RAT
2	b		A 1 (A)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY2_RAT	406E(P) 408Q(A) 409R(D) 412S(A) 417D(P) 430L (identity: 16.7 %/41.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1trm_B_1 identity=41.4%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                 *     *  *     * * *** * ** ** * * **  * :
1trm_B_1       1:IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNI-NVLEGNEQFVNAA----KIIKHPNFDRKTLNNNIMLIKLSSPV:  94
SecStr          : BS EE  TT STTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SBT-TS  S  EEEEEE----EEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbb-eeeeeebeebebe----eeeebeebeeeebebbbbbbbbeeeb:    

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTS-EVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *  * **           * ***** *   *      *      *     *   *     **  * * *** *  ********** *        :
1trm_B_1      95:KLNARVATVALPSSCAPAGTQ--CLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASY--PGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGE----: 186
SecStr          :  SSSS   B  SS   TT E--EEEEESS   SSS    SB EEEEEEB  HHHHHHHS--TTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebeebeeebeeebe--bebbbbbbbeeeeeeebeebbbbebbbbeeeebeebb--eeebeebbbbbbbeebeebbbeebbbbbbbbeeb----:    
Contact         :                                                   b bb  b    b            b                        

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *    ***     * :
1trm_B_1     187:LQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGTHHHHHHHHHH :    
ExpBur          :bbbbbbeeeebbeeebbbbbbebbebeebbeebeeee:

Protein Model on 1trm_B_1_A_1 (TEMPLATE: 1trm )

Input Residue Numbers for Focused Sites