[pdbjlvh2]Protein Model on 1p2q_A_1_H

Protein Model on 1p2q_A_1_H_1 (TEMPLATE: 1p2q )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:3] [assembly_id:4]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [239 aa]	Chymotrypsinogen A :CTRA_BOVIN
2	b		H 1 (A)	non-polymer(TRS)	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL	275V(D) 280V(F) 297C 298V(G) 300K(T) 303N(D) (identity: 16.7 %/40.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1p2q_A_1 identity=40.5%

queryA       251:SRQSRIVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIAL: 348
                :*    ** ** * ** *******      * **** *   * ******              **   * *           **     * * * **** *:
1p2q_A_1      11:SXXXXIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITL: 105
SecStr          : ---- BT EE  TTSSTTEEEEE TT  EEEEEEESSSSEEEE GGG   TTS-----EEEES SBTT SSS  EEEEEEEEEE TT  TTT  S  EE:    
ExpBur          :e----bbeeeebeebbbbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----ebbbbbbeeeeeeeeeeebebeeebebeebeeeeebbbbbb:    
Contact         :                        b     b                bb b  b                                              

queryA       349:MKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                : **     *   *  ****           *   *** *      *   *  *   *     *         *  ******     * ** ******** :
1p2q_A_1     106:LKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYXXANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVC: 201
SecStr          :EEESS    BTTB   B   TT    TT EEEEEES  S  --    SB EEEEEEB  HHHH--HHHHGGG  TTEEEEE-- SS B  TT TT EEEE:    
ExpBur          :bebeeebeeeeebbbbbebeeeeebeeeeebbbbbbbbeee--eeebeebbbbebebbeeeeb--eeebeeebeebbbbbb--eeebbbbebbbbbbbbb:    

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                : **  * * *  ****       ****  *     *      * :
1p2q_A_1     202:KKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 245
SecStr          :EETTEEEEEEEEEE  TT  TTSEEEEEEGGGTHHHHHHHHHH :    
ExpBur          :eeeebbbbbbbbbeebeebeeebbbbbbbbbebbebbeebbeee:

Protein Model on 1p2q_A_1_H_1 (TEMPLATE: 1p2q )

Input Residue Numbers for Focused Sites