Protein Model on 1p0s_B_1_H_1 (TEMPLATE: 1p0s )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (H) polymer(polypeptide(L)) [235 aa] Coagulation factor X precursor :FA10_HUMAN
2 b H 1 (H) non-polymer(NA) SODIUM ION 429F(Y) 430L(D) 466A 467K(R) 470R(K) (identity: 20.0 %/38.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1p0s_B_1 identity=38.2%
queryA       256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
                :****     *  ***  *    *   *** *     * *****    *          *  *      *  *   ** ** *      *   ***   * :
1p0s_B_1       1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK:  95
SecStr          : BSSEE  TTTSTTEEEEEETT  EEEEEEE SSSEEEE GGG----GTT SSEEEEES - BSSS  S  EEEEEEEEEE TT  TTSSTT  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbbeebbbbbbeb----beebeebebbbbb-ebeeeeeeebbebebeeeeebeebeeeeebbbbbbbbbe:    

queryA       353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
                : * **   * * ***        *        ** * * ***  *  *    *       *         **  * ***      * ******** **  :
1p0s_B_1      96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr          :S    BTTB   B   HHHHHHTTTTSSEEEEEES BSSSSS B SB EEEEEEEE HHHHHHH SS--   TTEEEES SSSS B  TT TT EEEEEE:    
ExpBur          :eebeeeebbeebeebeeeebeeebbeeebbbbbbbbeeebeeeebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbebbbbbbee:    
Contact         :                                                                               bb                   

queryA       450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                :       *  *** ***     * *  *  *  ** * *  :
1p0s_B_1     194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234
SecStr          :TTEEEEEEEEEEESSSS TT  EEEEEGGGGHHHHHHHS  :    
ExpBur          :eeeebbbbbbbbeeebeeeeebbbbbbbbebbebbeebbee:    
Contact         :                bb  b                                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123