[pdbjlvh2]Protein Model on 1oph_B_1_A

Protein Model on 1oph_B_1_A_1 (TEMPLATE: 1oph )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [223 aa]	Trypsinogen, cationic precursor :TRY1_BOVIN
2	b		A 1 (A)	polymer(polypeptide(L)) [375 aa]	Alpha-1-antitrypsin precursor :A1AT_HUMAN	279H 280V(F) 281C 296H 340K(N) 342K(L) 419L(Q) 435D 436S 437C 438Q 439G 440D 441S(A) 460S 461W 462G 463S 464G 467K(Q) 472G (identity: 71.4 %/40.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1oph_B_1 identity=40.5%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                       *  *     * * ** * * * **** * **    :
1oph_B_1      21:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA: 114
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SSS-SS  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbbbbbb-eeeeeeebebeb----eeeeebeeeeeeebebbbbbbbbeeeb:    
Contact         :                       bbb              b                                           b b             

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *    **           * ***** *   *     **   *        * *   *   **  * *** * *  ****** *** * *      :
1oph_B_1     115:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDAGGPVVCSGK----: 206
SecStr          :  SSSS   B  SS   TT E--EEEEES    SSS    SS EEEEEEB  HHHHHH--HSTTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebebbeeeeeeeee--bbbbbbbbeeeeeeeebeebebbebebbeeeebee--bbeeebeebbbbbbeeebeebbbeebbbbbbbbeee----:    
Contact         :                                      b                         b               bbbbbbb             

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *******    ****  *     **       :
1oph_B_1     207:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 243
SecStr          :EEEEEEE SSSSBTTB EEEEEGGGSHHHHHHHHHT :    
ExpBur          :bbbbbbeeeebbeeeebbbbbebbebbebbeebeeee:    
Contact         :     bbbbb  b    b

Protein Model on 1oph_B_1_A_1 (TEMPLATE: 1oph )

Input Residue Numbers for Focused Sites