Protein Model on 1mq5_A_1_D_1
(TEMPLATE: 
1mq5
)Protein Model on 1mq5_A_1_D_1
(TEMPLATE: 1mq5
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [233 aa] | COAGULATION FACTOR X HEAVY CHAIN :FA10_HUMAN | |
| 2 | b | D 1 (A) | non-polymer(XLC) | 3-CHLORO-N-[4-CHLORO-2-[[(4-CHLOROPHENYL)AMINO]CARBONYL]PHENYL]-4-[(4-METHYL-1-PIPERAZINYL)METHYL]-2-THIOPHENECARBOXAMIDE | 339S(K) 340K(E) 342K(Y) 386A(R) 389E 416Y(F) 435D 436S(A) 437C 438Q 459T(V) 460S 461W 462G 463S(E) 464G 465C 472G 473V(I) 474Y (identity: 55.0 %/38.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1mq5_A_1 identity=38.3% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
:**** * *** * * *** * * ***** * * * * * ** ** * * *** * :
1mq5_A_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95
SecStr : BSSEE TTS TTEEEEEETTS EEEEEEE SSSEEEE GGG----GGG SSEEEEES -SBTTS S EEEEEEEEEE TT BTTTTBT EEEEES:
ExpBur :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbeeebbbbbbbb----beebeebebbbbb-bbeeeeeebeeebeeeeeeebeebeeeeebbbbbbbebe:
Contact : bb b
queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
: * ** * * *** * ** * * *** * * * * ** * *** * ******** ** :
1mq5_A_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr :S BTTB B HHHHHHHTTTSSEEEEEESSBSSTTS B SB EEEEEEB HHHHHHH SS-- TTEEEES SSSS B TT TT EEEEEE:
ExpBur :eebeeeebbeebeebeeeebeeebbeeeebbbbbbbeeeeebeebeebbbbebebbeeeebeeebee--ebbebbbbbbeeeeebbbbebbbbbbbbbee:
Contact : b b b bbbb
queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
: * *** *** * * * * ** * * :
1mq5_A_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK: 233
SecStr :TTEEEEEEEEEE SSSS TT EEEEEGGGGHHHHHHHT :
ExpBur :eeeebbbbbbbbebebbeeeebbbbbebbebbebbeebbe:
Contact : bbbbbbb bbb
|
[assembly_id:1]
[help]