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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [234 aa] | Blood coagulation factor Xa :FA10_HUMAN | |
2 | b | D 1 (B) | non-polymer(IMA) | [4-({[5-BENZYLOXY-1-(3-CARBAMIMIDOYL-BENZYL)-1H-INDOLE-2-CARBONYL]-AMINO}-METHYL)-PHENYL]-TRIMETHYL-AMMONIUM | 340K(E) 341T 342K(Y) 386A(R) 389E 390K 391G 416Y(F) 435D 436S(A) 437C 438Q 441S 459T(V) 461W 462G 464G 465C 472G (identity: 68.4 %/38.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1lpg_B_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352 :**** * *** * * *** * * ***** * * * * * ** ** * * *** * : 1lpg_B_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95 SecStr : BSSEE TTTSTTEEEEEETTS EEEEEEE SSSEEEE GGG----GGS SSEEEEES -SBTTS S EEEEEEEEEE TT BTTTTBT EEEEES: ExpBur :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbeeebbbbbbbb----beebeebebbbbb-bbeeeeeebbeebebeeeeebeebeeeeebbbbbbbebe: Contact : bbb queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449 : * ** * * *** * ** * * *** * * * * ** * *** * ******** ** : 1lpg_B_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193 SecStr :S BTTB B HHHHHHHTTTSSEEEEEES BSSTTS B SB EEEEEEB HHHHHHH SS-- TTEEEES SSSS B TT TT EEEEEE: ExpBur :eebeeeebbeebeebeeeebeeebbeeeebbbbbbbeeeeeeeebeebbbbebebbeeeebeebbee--ebbebbbbbbeeeeebbbbebbbbbbbbbee: Contact : b bbb b bbbb b queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490 : * *** *** * * * * ** * * : 1lpg_B_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234 SecStr :TTEEEEEEEEEEESSSS TT EEEEEGGGGHHHHHHHHH : ExpBur :eeeebbbbbbbbebebbeeebbbbbbebbebbebbeebbee: Contact : b bb bb b |