[pdbjlvh2]Protein Model on 1jbu_A_1_E

Protein Model on 1jbu_A_1_E_1 (TEMPLATE: 1jbu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (H)	polymer(polypeptide(L)) [239 aa]	COAGULATION FACTOR VII :FA7_HUMAN
2	b		E 1 (H)	non-polymer(BEN)	BENZAMIDINE	275V 276Q(N) 278V(A) 279H(Q) 280V(L) 302L(K) (identity: 16.7 %/39.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1jbu_A_1 identity=39.0%

queryA       265:GAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAG----YQVEKVISHPNYDSKTKNNDIALMKLQKPLTFNDL: 360
                :*  **** * *     ***  *   * * ****  *  *    *      *         *      *  **    *   * * ****  *  *    * :
1jbu_A_1      10:GECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN----WRNLIAVLGEHDXXXHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDH: 105
SecStr          :G  TTEEEEEETTEEEEEEEE SSSEEEE GGGGS   S----    EEEEE   ---  TTEEEEEEEEEEEETT  TTSSSS  EEEEESS    BTT:    
ExpBur          :bbbbbbbbbbbeeeeebbbbbbeeebbbbbbebbeeeee----eeebbbbbbeee---eeeeebeeebbbbbbbeebeeebebbbbbbbebeeebeeeee:    
Contact         :          bb bbb                     b                                                              

queryA       361:VKPVCLPNPGM---MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :* * ***        *        ***        *   *    *    ** *   ** * *   **  * ***   *  *** ******  *     * :
1jbu_A_1     106:VVPLCLPERTFSERTLAFVRFSLVSGWXXXXXXXXTALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWY: 205
SecStr          :B   B   HHHHHHTGGG SEEEEEE --------  EEEEEEB  GGGHHHHTGGG  TT  S HHHHEEEEEEE S  TTHHHHTT EEEEEETTEEE:    
ExpBur          :beebeebeeeebeeebeeeeebbbbbb--------ebeeeebebbeeeebeebbeebeeeebbeebeeebbbbbebeeeeebeebbbbbbbbbeeeeeee:    

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***     ***  *     *    **  :
1jbu_A_1     206:LTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE: 242
SecStr          :EEEEEEE TT SSS EEEEEEEGGGTHHHHHHHHHS :    
ExpBur          :bbbbbbebebbeeebbebbbbebbbbbebbeebeeee:

Protein Model on 1jbu_A_1_E_1 (TEMPLATE: 1jbu )

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