Protein Model on 1iqe_A_1_D_1
(TEMPLATE: 
1iqe
)Protein Model on 1iqe_A_1_D_1
(TEMPLATE: 1iqe
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [235 aa] | coagulation Factor Xa :FA10_HUMAN | |
| 2 | b | D 1 (A) | non-polymer(XMB) | 4-[(2R)-3-[[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]AMINO]-1-OXO-2-[[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]AMINO]PROPYL]-THIOMORPHOLINE-1,1-DIOXIDE | 296H 304N(Q) 340K(E) 341T 342K(Y) 416Y(F) 435D 436S(A) 437C 438Q 441S 459T(V) 460S 461W 462G 464G 465C 472G 473V(I) 474Y (identity: 65.0 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1iqe_A_1 identity=38.2% |
queryA 256:IVGGESALPGAWPWQVSL-HVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYG--AGYQVEKVISHPNYDSKTKNNDIALMKLQ: 352
:**** * *** * * *** * * ***** * * * * * ** ** * * *** * :
1iqe_A_1 1:IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHC----LYQAKRFKVRVGD-RNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK: 95
SecStr : BS EE TTT TTEEEEEETTTEEEEEEEE SSSEEEE SGG----GTS SSEEEEES -SBSSS S EEE EEEEEE TT TTT TT EEEEES:
ExpBur :bbeeeebeeeebbbbbbbbbeeeebbbbbbbbeeebbbbbbbb----beeeeebebbbbb-ebeeeeeeebeebeeeeebebeebeeeeebbbbbbbebe:
Contact : b b bbb
queryA 353:KPLTFNDLVKPVCLPNPG---MMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSK: 449
: * ** * * *** * ** * * *** * * * * ** * *** * ******** ** :
1iqe_A_1 96:TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSF--IITQNMFCAGYDTKQEDACQGDSGGPHVTRF: 193
SecStr :S BTTB B HHHHHHHTTTSS EEEES SSTTS SB EEEE B HHHHHHH SS-- TTEE BS SSSS B TTTTT EEEEEE:
ExpBur :eebeeeebbeebeebeeeebeeebbeeeebbbbbbbeeeeeeeebbebbbbebebbeeeebeeebee--ebbebbbbbbeeeeebbbbebbbbbbbbbee:
Contact : b bbbb b
queryA 450:NNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
: * *** *** * * * * ** * * :
1iqe_A_1 194:KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT: 234
SecStr :TTEEEEEEEEEE SSSS TT EEEESGGGHHHHHHHHT :
ExpBur :eeeebbbbbbbeebebbeeebbbbbbbbbebbebbeebbee:
Contact : bbbb bb bbb
|
[assembly_id:1]
[help]