[pdbjlvh2]Protein Model on 1dpo_A_1_G

Protein Model on 1dpo_A_1_G_1 (TEMPLATE: 1dpo )

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[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY2_RAT
2	b		G 1 (A)	non-polymer(BEN)	BENZAMIDINE	274H(N) 301P(R) 302L(I) 303N(Q) 323G(N) (identity: 0.0 %/41.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1dpo_A_1 identity=41.4%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                 *     *  *     * * *** * ** **** * **  * :
1dpo_A_1       1:IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNI-NVLEGNEQFVNAA----KIIKHPNFDRKTLNNDIMLIKLSSPV:  94
SecStr          : BS EE  TT STTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SBT-TS  S  EEEEEE----EEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbb-eeeeeebbebebe----ebeebeebeeeebebbbbbbebeeeb:    
Contact         :                  b                          bbb                   b                                

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTS-EVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *  * **           * ***** *   *      *      *     *     *   **  * * *** *  ****** *** *        :
1dpo_A_1      95:KLNARVATVALPSSCAPAGTQ--CLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEAS--YPGKITDNMVCVGFLEGGKDSCQGDCGGPVVCNGE----: 186
SecStr          :  BTTB   B  SS   TT E--EEEEESS   SSS    SB EEEEEEB  HHHHHHH--STTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebeebeeeeeeebe--bebbbbbbbeeeeeeebeebbbbebbbbeeeebeee--beeebeebbbbbbbeebeebbbebbbbbbbbbeee----:    

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *    ***     * :
1dpo_A_1     187:LQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGG HHHHHHHHHH :    
ExpBur          :bbbbbbbeeebbeeebbbbbbbbbebbebbeebeeee:

Protein Model on 1dpo_A_1_G_1 (TEMPLATE: 1dpo )

Input Residue Numbers for Focused Sites