[pdbjlvh2]Protein Model on 1bda_A_1_C

Protein Model on 1bda_A_1_C_1 (TEMPLATE: 1bda )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [265 aa]	SINGLE CHAIN TISSUE TYPE PLASMINOGEN ACTIVATOR :TPA_HUMAN
2	b		C 1 (A)	non-polymer(2Z0)	N-{[5-(dimethylamino)naphthalen-2-yl]sulfonyl}-L-alpha-glutamyl-N-[(1S)-4-{[amino(iminio)methyl]amino}-1-(chloroacetyl) butyl]glycinamide	296H 342K(Y) 418N(R) 435D 436S(A) 438Q 439G 440D 441S 460S 461W 462G 463S(L) 464G (identity: 71.4 %/39.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1bda_A_1 identity=39.5%

queryA       244:CGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVH------VCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGA---GYQVEKVISH: 334
                :**    *  * ** **  *     ***                ***  *   **  ****       * * *   *  *      *       *** * *:
1bda_A_1       2:CGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFP-PHHLTVILG--RTYRVVPGEEEQKFEVEKYIVH:  98
SecStr          :BS        SEETTEEE  GGGSTTEEEEEEE TTSS EEEEEEEEEEETTEEEE SGGGTT   -GGGEEEEES-- SBSSS  SS EEEEEEEEEE :    
ExpBur          :ebebeeeebeeebebbbbbebbbbbbbbbbbbeeeeeeeeebbbbbbbbebbbbbbbbbbbeeebe-eeebbbbbb--bbeeeeeeeebbebebeebebb:    
Contact         :                                                          b                                         

queryA       335:PNYDSKTKNNDIALMKLQKPLTF----NDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGF: 429
                :   *  *  *****  *             *  ****     *     *  ** *  *      ** *  * * *    ** *        *  * *** :
1bda_A_1      99:KEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGD: 198
SecStr          :TT BTTTTBT  EEEEEE SSS  S   SSS B B   TT    TT EEEEEES BSSTT S B SB EEEEEEE  GGGSSTTTTTT    TTEEEEE :    
ExpBur          :eebeeebeebbbbbbebeeeeeebbeeeebbbbbbebeeebebeeebebbbbbbbeeeeeeeeebeebbbbebebbbeeebeeeebeeeebeeebbbbbb:    
Contact         :       b                                                                                b           

queryA       430:L-----QGNV-DSCQGDSGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :      * *  * **********        * *  *** **     ****  *    ***   **:
1bda_A_1     199:TRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMR: 264
SecStr          :    SSS       TT TT EEEEEETTEEEEEEEEEE STTT TT  EEEEEGGGGHHHHHHT  :    
ExpBur          :eeeeeeeebbbbbbebbbbbbbbbebeeebbbbbbbbbebebeeeebbbbbbebeebeebbeeebe:    
Contact         :           bb bbbb                  bbbbb

Protein Model on 1bda_A_1_C_1 (TEMPLATE: 1bda )

Input Residue Numbers for Focused Sites