[pdbjlvh2]Protein Model on 1amh_A_1_B

Protein Model on 1amh_A_1_B_1 (TEMPLATE: 1amh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	ANIONIC TRYPSIN :TRY2_RAT
2	b		B 1 (B)	polymer(polypeptide(L)) [223 aa]	ANIONIC TRYPSIN :TRY2_RAT	278V(Y) 280V(F) 296H 342K(L) 386A(N) 388E(L) 389E(S) 390K(S) 391G 392K(V) 416Y 417D(P) 419L(K) 438Q 461W 463S(Y) 465C 466A 467K(L) (identity: 36.8 %/41.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1amh_A_1 identity=41.4%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                 *     *  *     * * *** * ** **** * **  * :
1amh_A_1       1:IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNI-NVLEGNEQFVNAA----KIIKHPNFDRKTLNNDIMLIKLSSPV:  94
SecStr          : BS EE  TTS TTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SBT-TS  SS EEEEEE----EEEE TT BTTTTBT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbeb-eeeeeebeebebe----eebebeebeeeebbbbbbbbebeeeb:    
Contact         :                      b b               b                                             b             

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTS-EVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *  * **           * ***** *   *      *      *     *     *   **  * * *** *   ********* *        :
1amh_A_1      95:KLNARVATVALPSSCAPAGTQ--CLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEAS--YPGKITDNMVCVGFLEGGKSSCQGDSGGPVVCNGE----: 186
SecStr          :   SSS   B  SS   TT E--EEEEE     SSS    SB EEEEEE   HHHHHHH--STT   TTEEEES SSSS B  TTSTT EEEETTE----:    
ExpBur          :eeeeebeebebbeeebeeebe--bebbbbbbeeeeeeeebeebbbbebebbeeeebeeb--beeebeeebbbbbeeeeeebbbebbbbbbbbbeeb----:    
Contact         :                              b bbbbb                        bb b                  b                

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *    ***     * :
1amh_A_1     187:LQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN: 223
SecStr          :EEEEEEESSTTTS SS EEEEEGGGSHHHHHHHHHH :    
ExpBur          :bbbbbbeeebbeebeebbbbbebbebeebbeebeeee:    
Contact         :      b b bbb

Protein Model on 1amh_A_1_B_1 (TEMPLATE: 1amh )

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