[pdbjlvh2]Protein Model on 1a0l_A_1_B

Protein Model on 1a0l_A_1_B_1 (TEMPLATE: 1a0l )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [244 aa]	BETA-TRYPTASE :TRYB2_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [244 aa]	BETA-TRYPTASE :TRYB2_HUMAN	321F(Y) 322Y 390K(R) 392K(P) 393T(P) 394S(P) 395E(F) (identity: 14.3 %/40.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1a0l_A_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
1a0l_A_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEEESSSEEEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE   SBTTTT   B EEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbbeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeebeebbbbbbbbb:    
Contact         :                       b                                            bb                              

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
1a0l_A_1      98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT  EEEEES  SBTTB   TT B EEEEE EE HHHHHHHHHTT  S TTS SS TTEEEE --BTTBB  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeebebbbbbbbbbeeeeebeeeebbbbbebebbebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbebbbb:    
Contact         :                                        b bbbb                                                      

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
1a0l_A_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEETGGGHHHHHH:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee:

Protein Model on 1a0l_A_1_B_1 (TEMPLATE: 1a0l )

Input Residue Numbers for Focused Sites