CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY3_SALSA | |
2 | b | D 2 (D) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY3_SALSA | 272S 278V(Y) 280V(F) 303N(Q) 305P(R) 311F(I) 312A 314I(V) 315L(N) 321F 384W 391G(S) 393T(Y) 394S(P) 395E(D) (identity: 26.7 %/38.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1a0j_A_1 identity=38.7% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * ** * **** * * * **** * * *** ** * * *** * ** ** : 1a0j_A_1 1:IVGGYECRKNSASYQASLQ-SGYHFCGGSLISSTWVVSAAHCYKSRIQVRLGEHNIA-VNEGTEQFIDS----VKVIMHPSYNSRNLDNDIMLIKLSKPA: 94 SecStr : BS EE SSTTTTEEEEE-ETTEEEEEEESSSSEEEE GGG SS EEEES SBSS-S S EEEEE----EEEEE TT BTTTTBT EEEEESS : ExpBur :bbeeeebeeeebbbbbbbe-beeeebbbbbbeeebbbbbbebeeeebebbbbbeeee-eeeebbbebeb----eebeebeeeeeeebbbbbbbbebeeeb: Contact : b b b b b bb bb b queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWG-ATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * * ** * **** * *** * ** * **** * ********** * : 1a0j_A_1 95:SLNSYVSTVALPSS--CASSGTRCLVSGWGNLSGSSSNYPDTLRCLDLPILSSSSCNS--AYPGQITSNMFCAGFMEGGKDSCQGDSGGPVVCNGQ----: 186 SecStr : BTTB B SS-- TT EEEEEESS S SSS SB EEEEEEB HHHHHH--HSTTT TTEEEES TT S B TT TT EEEETTE----: ExpBur :eeeeebeebeebee--eeeeebebbbbbbbbebeeeeeebebbebbebebbeeeebee--bbeeebeebbbbbbbbebeebbbeebbbbbbbbeeb----: Contact : b b bbb queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * *** *** **** * ** * : 1a0j_A_1 187:LQGVVSWGYGCAQRNKPGVYTKVCNYRSWISSTMSSN: 223 SecStr :EEEEEEE SSSS TT EEEEEGGGGHHHHHHHHHH : ExpBur :bbbbbbbeeebbeeeebbbbbebbebeebbeebeeee: |