[pdbjlvh2]Protein Model on 1a0j_A_1_D

Protein Model on 1a0j_A_1_D_1 (TEMPLATE: 1a0j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY3_SALSA
2	b		D 1 (D)	polymer(polypeptide(L)) [223 aa]	TRYPSIN :TRY3_SALSA	386A(L) 387T(S) 389E(S) 390K(S) 392K(N) 431Q(E) (identity: 0.0 %/38.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1a0j_A_1 identity=38.7%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****          * **     * **** *   * * ****              *        *        *** ** * *    *** * ** ** :
1a0j_A_1       1:IVGGYECRKNSASYQASLQ-SGYHFCGGSLISSTWVVSAAHCYKSRIQVRLGEHNIA-VNEGTEQFIDS----VKVIMHPSYNSRNLDNDIMLIKLSKPA:  94
SecStr          : BS EE  SSTTTTEEEEE-ETTEEEEEEESSSSEEEE GGG  SS EEEES SBSS-S  S  EEEEE----EEEEE TT BTTTTBT  EEEEESS  :    
ExpBur          :bbeeeebeeeebbbbbbbe-beeeebbbbbbeeebbbbbbebeeeebebbbbbeeee-eeeebbbebeb----eebeebeeeeeeebbbbbbbbebeeeb:    

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWG-ATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *  * **           *  ****            *            ***   *   **  * ****  *  ********** *        :
1a0j_A_1      95:SLNSYVSTVALPSS--CASSGTRCLVSGWGNLSGSSSNYPDTLRCLDLPILSSSSCNS--AYPGQITSNMFCAGFMEGGKDSCQGDSGGPVVCNGQ----: 186
SecStr          :  BTTB   B  SS--   TT EEEEEESS S SSS    SB EEEEEEB  HHHHHH--HSTTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebeebee--eeeeebebbbbbbbbebeeeeeebebbebbebebbeeeebee--bbeeebeebbbbbbbbebeebbbeebbbbbbbbeeb----:    
Contact         :                               bb bb b                                      b                       

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *     **   *   :
1a0j_A_1     187:LQGVVSWGYGCAQRNKPGVYTKVCNYRSWISSTMSSN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHH :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebeebbeebeeee:

Protein Model on 1a0j_A_1_D_1 (TEMPLATE: 1a0j )

Input Residue Numbers for Focused Sites