[pdbjlvh2]Protein Model on 5zoj_A_1_C

Protein Model on 5zoj_A_1_C_1 (TEMPLATE: 5zoj )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(SMAD3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [187 aa]	Mothers against decapentaplegic homolog 2 :SMAD2_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [186 aa]	Mothers against decapentaplegic homolog 2 :SMAD2_HUMAN	229P 241N 247T 249H 361E 364Y 390T 395W 397E 399H 401N 404L 405Q 407L 408D 409K 412T (identity: 100.0 %/97.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5zoj_A_1 identity=97.9%

queryA       228:EPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWH: 327
                :******** ****************** ************************** ** ******************************************:
5zoj_A_1      12:EPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWH: 111
SecStr          :  S SEEEEEEETTEE S  EE  SSEEEEESS  SS TTEEE TT   TT  HHHHHHHHT TT EEEEEETTEEEEEE SSS EEEE HHHHHHHT  :    
ExpBur          :eeeebbbbbbbbeeeebeeebebeeeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebeeeeeebbbebebeebbbbbbbbbbeeeeee:    
Contact         : b           b     b b                                                                              

queryA       328:PATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQM: 414
                :***************************************************************************************:
5zoj_A_1     112:PATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQM: 198
SecStr          :TT  EEE TT EEEEEEHHHHHHHHHHHHTT HHHHHGGGGGGEEEEEES   SSSSS  SGGGSSSEEEEEEHHHHHHHHHHHHH :    
ExpBur          :eeebbebeeeeebebbbbeebeebbeebeeeeeeebeebeebbbbebbbbebbbeeeebeebeebbbbbbbebebbeeebeeeeeee:    
Contact         :                                 b  b                         b    b b b b  bb bbb  b

Protein Model on 5zoj_A_1_C_1 (TEMPLATE: 5zoj )

Input Residue Numbers for Focused Sites