[pdbjlvh2]Protein Model on 1dd1_B_1_A

Protein Model on 1dd1_B_1_A_1 (TEMPLATE: 1dd1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(SMAD3_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [249 aa]	SMAD4 :SMAD4_HUMAN
2	b		A 1 (A)	polymer(polypeptide(L)) [221 aa]	SMAD4 :SMAD4_HUMAN	238Y(F) 241N(D) 246E 247T 357N(A) 358Q(A) 359G 364Y(D) 367T(R) 390T(K) 397E 399H 401N(H) 404L 407L 408D 412T(H) (identity: 47.1 %/50.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1dd1_B_1 identity=50.8%

queryA       229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325
                :*  **** * *    *****    * *  ****  ***   ***** **** *  * *  * *** ** *   * * *   **** * ****       *:
1dd1_B_1      36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135
SecStr          : SEEEEEEEEETTEE S  EEEETT  EEEEESS     SSEEE SS   TT  HHHHHHHTT TT EEEEEETTTEEEEEE SSS EEEE HHHHHHTT:    
ExpBur          :beebbbbbbbbeeeebeeebebeeeeeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebebebebebeebbbbebebbbeeee:    
Contact         :         b  b    bb                                                                                 

queryA       326:WHPA-TVCKIPPGCNLKIFNNQE-----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTV: 389
                :  *   * ** *    * *                                        *     *   *   *  * * *  *********  * **  :
1dd1_B_1     136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIXXXXXXXXXAPAISLSAAAGI-GVDDLRRLCILRMSFVKGWGPDYPRQSI: 234
SecStr          :  TT  EEEE TT EEEEE HHHHHHHHHHHHHHHHHHHHHHHHHSS   ---------    EE   TTT-THHHHGGGGEEEEEES   STTSS  SG:    
ExpBur          :eeeeebbbbbeeebebebbbbebbbebbeeebeebeeebeeebeeeeeee---------eeeeeeeeeeee-eeeebeebbbbebbbbebbbeeeebeeb:    
Contact         :                                                                   bbb    b  b                      

queryA       390:TSTPCWIELHLNGPLQWLDKVLTQM: 414
                :  ****** **   ** ** **  *:
1dd1_B_1     235:KETPCWIEIHLHRALQLLDEVLHTM: 259
SecStr          :GGSSSEEEEEEHHHHHHHHHHHTTS:    
ExpBur          :eebbbbbbbebebbebbbeebeeee:    
Contact         :b      b b b  b  bb   b

Protein Model on 1dd1_B_1_A_1 (TEMPLATE: 1dd1 )

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