[pdbjlvh2]Protein Model on 1dd1_A_1_B

Protein Model on 1dd1_A_1_B_1 (TEMPLATE: 1dd1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(SMAD3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [221 aa]	SMAD4 :SMAD4_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [249 aa]	SMAD4 :SMAD4_HUMAN	246E 260F(Y) 261T(V) 262D 263P 268R 272G 273L(Q) 274L 275S 277V 278N(H) 279R 284E 287R 288R(L) 289H 291G 310D (identity: 73.7 %/49.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1dd1_A_1 identity=49.5%

queryA       229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325
                :*  **** * *    *****    * *  ****  ***   ***** **** *  * *  * *** ** *   * * *   **** * ****       *:
1dd1_A_1      36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135
SecStr          : SEEEEEEEEETTEE S  EEEETT SEEEEES      TTEEE SS   TT  HHHHHHHTTTTT EEEEEETTTEEEEEE SSS EEEE HHHHHHHT:    
ExpBur          :beebbbbbbbbeeeebeeebebeeeeeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebbbebebebeebbbbebebbbeeee:    
Contact         :                 b               bbbb    b   bbbb bbb    b  bbb b                   b               

queryA       326:WHPA-TVCKIPPGCNLKIFNNQEFAALLAQSVNQGFE----------------------------------AVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390
                :  *   * ** *    * *          *                                          *  * * *  *********  * **   :
1dd1_A_1     136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIK: 235
SecStr          :  TT  EEEE TT EEEEE HHHHHHHHHHHHHHHTTTT  --------------------------  S  HHHHHGGGEEEEEES   STTSS  SGG:    
ExpBur          :beeeebbbbbeeebebebbbbebbbeebeeebeebeeeeee--------------------------eeeeeeeebeebbbbbbbbbebbbeeeebeebe:    

queryA       391:STPCWIELHLNGPLQWLDKVLTQM: 414
                : ****** **   ** ** **  *:
1dd1_A_1     236:ETPCWIEIHLHRALQLLDEVLHTM: 259
SecStr          :GSSSEEEEEEHHHHHHHHHHHHHS:    
ExpBur          :ebbbbbbbebebbeebbeebeeeb:

Protein Model on 1dd1_A_1_B_1 (TEMPLATE: 1dd1 )

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