#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8cx9_D_1_W_1

Protein Model on 8cx9_D_1_W_1 (TEMPLATE: 8cx9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) D 1 (D) polymer(polypeptide(L)) [310 aa] Papain-like protease nsp3 :R1A_SARS2
2 b W 1 (D) non-polymer(CL) CHLORIDE ION 1003F 1004T 1051K (identity: 100.0 %/99.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8cx9_D_1 identity=99.7%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 848
                :****************************************************************************************************:
8cx9_D_1       9:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 108
SecStr          : EEEEEESSSSS EEEEE SSS HHHHHSSEEETTEE TT    TTTSS EEEE   SHHHHHHHHHHH    SSSHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebebbbbeeeeeeeebeeeebbbeebeebbbebeebeeeebeeeeeebebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbb:    

queryA       849:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 948
                :***************************************************************************************** **********:
8cx9_D_1     109:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCXQQQTTLKGVE: 208
SecStr          :    SSTHHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  SS EEEEEEE TT - EEEEEESGG:    
ExpBur          :beeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbebbbbbbbbbeeebeeeeebeebbeebbeebebeebebbbeeebeee-eeeeeeebbe:    

queryA       949:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1048
                :****************************************************************************************************:
8cx9_D_1     209:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 308
SecStr          :GTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEE SBTTB  EEEEE SSS EEEETTEEEE SSEEEEEEEE:    
ExpBur          :bbbbeebbbbeebeebbeeebeeeeebeeebbebbbebbbbbbeeeeeebeeeebebbbbeeeeeeeeebebbbeeeebbbbebeeeeeeeebebebbbb:    
Contact         :                                                      bb                                            

queryA      1049:FYKENSYTTTI:1059
                :***********:
8cx9_D_1     309:FYKENSYTTTI: 319
SecStr          :EEE   EE   :    
ExpBur          :bbebeeeebee:    
Contact         :  b                                                                                                 


Input Residue Numbers for Focused Sites

ex) 2,15,123