#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7skr_A_1_A_2

Protein Model on 7skr_A_1_A_2 (TEMPLATE: 7skr )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [314 aa] 3C-like proteinase :Q0QDZ2_SARS
2 b A 2 (A) polymer(polypeptide(L)) [314 aa] 3C-like proteinase :Q0QDZ2_SARS 756V 757D 759I(T) 760N 809L 812E 813A 816Y 817Y 825L 828Y 829M 832L 836K 839K 840Y(F) 841P 842Q 876A 878Q 879D(E) 882Y 883R 885R 886A 888E(D) 891N (identity: 85.2 %/81.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7skr_A_1 identity=81.8%
queryA       746:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 845
                :** ********** ***** ********* ************* ***  ****** *** ***** ******** * ***************** *** *:
7skr_A_1       5:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQHFGPTYLDGADVTKVKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 104
SecStr          :   EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TT    GGGTT EEEE    GGGHHHHHHHH    TTHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeebebebbeeeeeeeeeebeeeebbbeeeeebbbebbebbeeebeeebeeeebbbeeeeeeeeeebeeebebeeebbebbbebbeeebeebebeebee:    
Contact         :          bb bb                                                b  bb  bb       b  bb  b   b  bbbb   

queryA       846:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 945
                :********** **   ** ***** *** **** ******** *********** **************  * ***** * ***** *** ***  *** :
7skr_A_1     105:LTSIKWADNNUYLSSVLLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNLVCKHCGQKTTTLM: 204
SecStr          :EE   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TTS   HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbbbebebebeebbebbeebeeeebbebbbbbbbbbebebeeebebeebbbebbeebebeebebbbbbebeeeeeeeeeee:    
Contact         :                              b bb  bb bb b  b                                                      

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1045
                :*************   * ** *** **  ** ******* ********* * *  *** ** *********** *** ***** **** *** ****** :
7skr_A_1     205:GVEAVMYMGTLSYDELKAGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 304
SecStr          :GGGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEE:    
ExpBur          :ebebbbbeebbbbeebeeebeeebeeeeebebebeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeeeeebebbb:    

queryA      1046:TDVFYKENSYTTTI:1059
                :******* ******:
7skr_A_1     305:TDVFYKETSYTTTI: 318
SecStr          :EEEEEE S EE   :    
ExpBur          :bbbbbebeebebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123