#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7d7k_B_1_W_1

Protein Model on 7d7k_B_1_W_1 (TEMPLATE: 7d7k )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [312 aa] Non-structural protein 3 :R1AB_SARS2
2 b W 1 (B) non-polymer(SO4) SULFATE ION 919Q 946G 947V (identity: 100.0 %/99.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7d7k_B_1 identity=99.7%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 848
                :****************************************************************************************************:
7d7k_B_1       1:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 100
SecStr          :  EEEEESSSSS EEEE  TTS HHHHHSSEEETTEE SSS   SSS S EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :eeebebbbbeeeeeeeebeeebebeeebeebbeebeebbeeebeeebeebebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbb:    

queryA       849:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 948
                :******* ********************************************************************************************:
7d7k_B_1     101:IKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 200
SecStr          :    TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEETHH:    
ExpBur          :beeeeebbbbbbbbbbbbbbeeebebebbeebeeebeebebbebbbbbbbbbebebeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeebbe:    
Contact         :                                                                      b                          bb 

queryA       949:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1048
                :****************************************************************************************************:
7d7k_B_1     201:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 300
SecStr          :HHEEES   HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbbeebbebeebbebbebebeeeeebeebbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbbbbb:    

queryA      1049:FYKENSYTTTIK:1060
                :************:
7d7k_B_1     301:FYKENSYTTTIK: 312
SecStr          :EEE SEEE    :    
ExpBur          :bbebeebebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123