#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [301 aa] | papain-like protease :R1AB_CVMA5 | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [76 aa] | Ubiquitin :UBB_HUMAN | 851W(Q) 854N 855N 856C(S) 857Y 907L(P) 908G(S) 909D 911R(I) 912E(D) 915S(R) 919Q(R) 932V(F) 942T(E) 944L(R) 948E(D) 952Y(H) 953M(F) 967I 968P(A) 969C 970T 992P(T) 993P 1009Y(F) 1014Q(S) 1015C(V) 1016G 1017H 1018Y 1046T (identity: 38.7 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5wfi_A_1 identity=31.1% |
queryA 750:IKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSI: 849 : * *** * * * * ** *** ** * * * * * * * * : 5wfi_A_1 3:VDVLCTVDGVNFRSCCVAEGEVFGKTLGSVFCDGINVTKVRCSAIYKGKVFFQYSDLSEADLVAVKDAFGFDEPQLLKYYTMLGMCK-WPVVVCGNYFAF: 101 SecStr :EEEEEESSSSS EEEEEETTSBHHHHH SEEETTEE TTSB GGGTT EEEE SS HHHHHHHHHHH HHHHHHHHHHHHH - EEEETTEEEE: ExpBur :bebebbbbbeeeeebebeeeeebeeebeebbbeeeebbeeebeeebeeeebebbeebeeeeeebbeebbbbeeeebebbbebbeebe-beeeebeeebbb: queryA 850:KWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEA: 949 :* ** * * * ** *** * * * * * * ** * * * * * * *** ** * *** *: 5wfi_A_1 102:KQSNNNSYINVACLMLQHLSLKFPKWQWQEAWNEFRSGKPLRFVSLVLAKGSFKFNEPSDSIDFMRVVLREADLSGATCNLEFVCK-CGVKQEQRKGVDA: 200 SecStr : S TT HHHHHHHHHHTT SSHHHHHHHHHHHTT HHHHHHHHHHS TT HHHHHHHHHHHS TT EEEEEEEET-TEEEEEEEETHHH: ExpBur :eeeeebbbbbbbbbbbbebebebeeebbeebbeebeeeebeebbbbbbbeeebeeeeeeebbebbebbbebbebeebbbebebebe-eeeeeeeeebbeb: Contact : b bbbb bbb bb b b b b b b queryA 950:VMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVF:1049 :** *** * * **** * ** * * * * ** *** * * * * ** ** ** : 5wfi_A_1 201:VMHFGTLDKGDLVRGYNIACTCGSKLV-HCTQFNVPFLICSNTPEGRKLPDDVVA-ANIFTGG-SVGHYTHVKCKPKYQLYDACNVNKVSEAKGNFTDCL: 297 SecStr :HEEES S HHHHHH EEEEETTEEEEE-EEEEEE SEEEEEEEEE TT SE-EEEEEES-SSEEEEEEEETTEEEEEETTEEEE S S EEEEE: ExpBur :bbbeebbbebebeebbeeebeeeeeeb-ebeeeebebbbbbbeeeeeebbeebeb-bbbbeee-eeeebbbbbbeeebeebebbeeeeeeebeeebbbbb: Contact : bb bbbb bb b bbbbb b queryA 1050:YKEN:1053 :* *: 5wfi_A_1 298:YLKN: 301 SecStr :EE : ExpBur :beee: |