#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [248 aa] | Replicase polyprotein 1ab :R1AB_IBVB | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [76 aa] | Ubiquitin-40S ribosomal protein S27a :RS27A_BOVIN | 851W 854N(G) 855N 856C(S) 857Y(W) 907L(F) 908G(S) 909D 911R(N) 912E(W) 915S(A) 916Y(N) 947V(L) 948E 954G(R) 965V(Y) 966Q(S) 967I(N) 969C(P) 990S(F) 991A (identity: 23.8 %/25.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5bz0_A_1 identity=25.3% |
queryA 836:KKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVL--NVV: 933 : ** * * * * ** * * * * * * * * ** * * * * * * : 5bz0_A_1 84:QKWNVQYRDNFLILEWRDGNSWISSAIVLLQAAKIRFK-GFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLAEHFDADYTNAFLKKRVS: 182 SecStr : EEEETTEEEE TTTHHHHHHHHHHHHTT B -THHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB S TTT EEEEEEE: ExpBur :eebeeeebeebbbbeebebbbbbbbbbbbbbbbebebe-ebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebbebbeebbeebeeebeebbbebebe: Contact : b bbbb bbb bb bb queryA 934:CKTCGQQQTTLKGVEAVMY-MGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSA: 991 :* ** * * ** ** *** * * *: 5bz0_A_1 183:CN-CGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFA: 240 SecStr :ET-TEEEEEEEEHHHHHEEEESSSSHHHHHEEEEE TTT EEEEEEEEEEEEEEEEEE: ExpBur :ee-eeeeeeebebeebbbbebebbbbeebeeeeeebeeeebebebbbeebebebbbbeb: Contact : bb b b bbb b bb |