[pdbjlvh2]Protein Model on 1jxo_A

Protein Model on 1jxo_A_1 (TEMPLATE: 1jxo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(PALS1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [261 aa]	postsynaptic density protein :DLG4_RAT

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1jxo_A_1 identity=35.9%

queryA       348:IHVKAHFDYDPSDDPYVPCREL--GLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKR: 445
                :    * ****   *    *  *   ***  ** ****   *  **** *          *  * *     **                  *   * *   :
1jxo_A_1       8:FYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVXXXXXXXXIGFIPSKRRVERRE------------------WSRLKAKD--:  83
SecStr          :EEEEESS B HHHH----H   SSB  B TT EEEEEE  SSSEEEEEE -------- EEEE HHHHHHHH------------------HHHHHTTT--:    
ExpBur          :eebbbbeeeebeee----eeeeeeebebbbeebbebeeeeeebebebeee--------ebebbbeeebeeee------------------eebeeeee--:    

queryA       446:KKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAGK: 544
                :                  * **            ****  **     *     *     * * * ******         ******* *   * ** * *:
1jxo_A_1      84:----WGXXXXXXXXXXXVLSYETVT--QMEVHYARPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRXXXXXXXXXRDYHFVSSREKMEKDIQAHK: 174
SecStr          :----T -----------   EEE E--EEE SS   EEEESTTHHHHHH---HHHHH TTTEE    EE  ---------   EE S HHHHHHHHHTT :    
ExpBur          :----ee-----------eebbeebe--eeebebbbbbbbbebbbeebbe---ebeeeeeebbbebeeebbe---------eeeeebeeeebbeeeeeeeb:    

queryA       545:FIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIV: 644
                :*** *     *****  *** *   ** * *         *    * *  *** * * *          *    *  *         **     *     :
1jxo_A_1     175:FIEAGQXXSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIVE: 270
SecStr          :EEEEE --   EEEEHHHHHHHHHTTSEEEE   THHHHHHHHTT   EEEEE  SSHHHHHHH---- TTS HHHHHHHHHHHHHHHHHHGGG SEEE :    
ExpBur          :bbeeee--eebebbbbebbeebbeeeebbbbebebebbeebeebebbbbbbbbbbeeeebbeeb----beeeeeeebbbbeeebeeeeeebbebbbbbbe:    

queryA       645:NSDLDKAYQELLRLINKLDTEPQWVPS: 671
                :       *    * *  *     *** :
1jxo_A_1     271:GDSFEEIYHKVKRVIEDLSGPYIWVPA: 297
SecStr          : SSHHHHHHHHHHHHHHT SSEEEE  :    
ExpBur          :beebeebbeebeebbeeeeeeebebee:

Protein Model on 1jxo_A_1 (TEMPLATE: 1jxo )

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