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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | H 1 (F) | polymer(polypeptide(L)) [121 aa] | Mothers against decapentaplegic homolog 5 :SMAD5_MOUSE | |
2 | b | D 1 (A) | polymer(polypeptide(L)) [122 aa] | Mothers against decapentaplegic homolog 5 :SMAD5_MOUSE | 12V 15L 16L 18W 19K 20K(Q) 21G 22E(D) 28E 31C(A) 35V 36K(D) 39V 48L(M) 51L 55I(L) 56T(S) 91L(V) 92W 93R 95P (identity: 61.9 %/70.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5x6m_H_1 identity=70.8% |
queryA 10:PIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMEL: 108 :* ******** * **** **** ******* * ***** ** ************************* ****** ***** : 5x6m_H_1 13:PAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDI: 109 SecStr : HHHHHTT H---HHHHHHHHHHHHHHHHHHSSSHHHHHHHHHH SSS EEE SS EEETTEEE HHHHHHHHHT TT GGGEEE TT: ExpBur :eeeeeeeeeeeeee---eeebbebbeeebeeebeeeeebeebbeebeeeeeeebebbebebeeebebebeeeeebbbbbbbeeeebeebeeeebbbeeee: Contact : b bb bbbbb b b bb b b b bb bbb b queryA 109:CEFAFNMKKDEVCVNPYHYQRVET: 132 :*** * * *** ***** *** : 5x6m_H_1 110:CEFPFGSKQKEVCINPYHYKRVES: 133 SecStr : SS GGG SEEE GGGEEE : ExpBur :beebeeeeeebbbbbbebbbeeee: |