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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | D 1 (A) | polymer(polypeptide(L)) [122 aa] | Mothers against decapentaplegic homolog 5 :SMAD5_MOUSE | |
2 | b | B 1 (C) | polymer(polydeoxyribonucleotide) [22 base] | DNA (5'-D(P*AP*TP*CP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*AP*TP*A)-3') | 41K 70S 71L 74R 75L 76Q 77V 78S 79H 81K (identity: 100.0 %/70.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5x6m_D_1 identity=70.8% |
queryA 10:PIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMEL: 108 :* ******** * **** **** ******* * ***** ** ************************* ****** ***** : 5x6m_D_1 13:PAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDI: 109 SecStr :HHHHHHHTT H---HHHHHHHHHHHHHHHHHSSHHHHHHHHHHHH SSS EEE SS EEETTEEE HHHHHHHHHT TT STTEEE TT: ExpBur :eeeeeeeeeeeeee---eeebeeebeeebeeebeeeeebeebbeebeeeeeeeeeebebebeeebebebeeeeebbbbbbbeeeebeebeeeebbbeeee: Contact : b bb bbbbbb b queryA 109:CEFAFNMKKDEVCVNPYHYQRVET: 132 :*** * * *** ***** *** : 5x6m_D_1 110:CEFPFGSKQKEVCINPYHYKRVES: 133 SecStr : SS STT SEEE GGGEEE : ExpBur :beebeeeeeebbbbbbebbeeeee: |